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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:surface structure morphology trait
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Accession:VT:0015066 term browser browse the term
Definition:Any measurable or observable characteristic related to the shape, structure, color or pattern of the organism subdivision which is the collection of anatomical structures on the body surface.


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coat/hair pigmentation trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Coatc1 Coat color QTL1 IDA RGD PMID:19363126 RGD:2313383 NCBI chr14:20,189,386...65,189,386 JBrowse link
Q Coatc10 Coat color QTL 10 IDA RGD PMID:26796131 RGD:10755346 NCBI chr 7:13,952,179...58,952,179 JBrowse link
Q Coatc11 Coat color QTL 11 IDA RGD PMID:26796131 RGD:10755346 NCBI chr 7:24,731,465...69,731,465 JBrowse link
Q Coatc12 Coat color QTL 12 IDA RGD PMID:26796131 RGD:10755346 NCBI chr 7:38,547,706...83,547,706 JBrowse link
Q Coatc13 Coat color QTL 13 IDA RGD PMID:26796131 RGD:10755346 NCBI chr13:77,694,986...114,033,958 JBrowse link
Q Coatc14 Coat color QTL 14 IDA RGD PMID:26796131 RGD:10755346 NCBI chr12:1...23,035,872 JBrowse link
Q Coatc15 Coat color QTL 15 IDA RGD PMID:26796131 RGD:10755346 NCBI chr14:21,457,565...66,457,565 JBrowse link
Q Coatc16 Coat color QTL 16 IDA RGD PMID:26796131 RGD:10755346 NCBI chr 3:130,006,659...175,006,659 JBrowse link
Q Coatc2 Coat color QTL 2 IDA RGD PMID:20364790 RGD:2317982 NCBI chr14:33,039,912...61,783,215 JBrowse link
Q Coatc3 Coat color QTL 3 IDA RGD PMID:20364790 RGD:2317982 NCBI chr15:21,021,342...52,831,189 JBrowse link
Q Coatc4 Coat color QTL 4 IDA RGD PMID:20364790 RGD:2317982 NCBI chr17:3,336,972...24,030,841 JBrowse link
Q Coatc5 Coat color QTL 5 IDA RGD PMID:20364790 RGD:2317982 NCBI chr17:32,055,882...77,922,655 JBrowse link
Q Coatc6 Coat color QTL 6 IDA RGD PMID:26796131 RGD:10755346 NCBI chr 2:10,555,275...55,555,275 JBrowse link
Q Coatc7 Coat color QTL 7 IDA RGD PMID:26796131 RGD:10755346 NCBI chr 2:31,272,379...76,272,379 JBrowse link
Q Coatc8 Coat color QTL 8 IDA RGD PMID:26796131 RGD:10755346 NCBI chr 2:35,133,202...80,133,202 JBrowse link
Q Coatc9 Coat color QTL 9 IDA RGD PMID:26796131 RGD:10755346 NCBI chr 7:9,758,045...54,758,045 JBrowse link
femur mineral mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd1 Bone mineral density QTL 1 IDA RGD PMID:16180139 RGD:1553896 NCBI chr 1:254,393...86,904,217 JBrowse link
Q Bmd10 Bone mineral density QTL 10 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 2:9,444,679...68,866,454 JBrowse link
Q Bmd11 Bone mineral density QTL 11 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 4:24,631,874...69,631,874 JBrowse link
Q Bmd12 Bone mineral density QTL 12 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 4:137,171,018...182,171,018 JBrowse link
Q Bmd13 Bone mineral density QTL 13 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 5:107,119,214...152,119,214 JBrowse link
Q Bmd14 Bone mineral density QTL 14 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 6:6,161,722...76,002,731 JBrowse link
Q Bmd15 Bone mineral density QTL 15 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 7:12,687,850...67,801,690 JBrowse link
Q Bmd16 Bone mineral density QTL 16 IDA RGD PMID:16461031 RGD:1578307 NCBI chr10:100,155,035...110,992,275 JBrowse link
Q Bmd17 Bone mineral density QTL 17 IDA RGD PMID:16461031 RGD:1578307 NCBI chr15:26,381,041...106,550,657 JBrowse link
Q Bmd18 Bone mineral density QTL 18 IDA RGD PMID:16461031 RGD:1578307 NCBI chr15:26,381,041...106,550,657 JBrowse link
Q Bmd19 Bone mineral density QTL 19 IDA RGD PMID:18282130 RGD:2293456 NCBI chr 2:43,141,290...114,164,944 JBrowse link
Q Bmd20 Bone mineral density QTL 20 IDA RGD PMID:18282130 RGD:2293456 NCBI chr 6:13,122,958...21,165,729 JBrowse link
Q Bmd21 Bone mineral density QTL 21 IDA RGD PMID:18282130 RGD:2293456 NCBI chr 7:55,495,689...100,495,689 JBrowse link
Q Bmd22 Bone mineral density QTL 22 IDA RGD PMID:18282130 RGD:2293456 NCBI chr10:51,289,203...84,596,393 JBrowse link
Q Bmd23 Bone mineral density QTL 23 IDA RGD PMID:18282130 RGD:2293456 NCBI chr18:53,033,494...68,524,999 JBrowse link
Q Bmd24 Bone mineral density QTL 24 IDA RGD PMID:18282130 RGD:2293456 NCBI chr 2:43,141,290...114,164,944 JBrowse link
Q Bmd25 Bone mineral density QTL 25 IDA RGD PMID:18282130 RGD:2293456 NCBI chr10:51,289,203...84,596,393 JBrowse link
Q Bmd26 Bone mineral density QTL 26 IDA RGD PMID:18282130 RGD:2293456 NCBI chr12:17,960,865...38,409,001 JBrowse link
Q Bmd27 Bone mineral density QTL 27 IDA RGD PMID:18282130 RGD:2293456 NCBI chr 1:244,401,175...264,636,028 JBrowse link
Q Bmd28 Bone mineral density QTL 28 IDA RGD PMID:18282130 RGD:2293456 NCBI chr17:4,716,067...27,691,136 JBrowse link
Q Bmd3 Bone mineral density QTL 3 IDA RGD PMID:16180139 RGD:1553896 NCBI chr 8:44,458,129...118,087,517 JBrowse link
Q Bmd30 Bone mineral density QTL 30 IDA RGD PMID:18282130 RGD:2293456 NCBI chr10:51,289,203...84,596,393 JBrowse link
Q Bmd40 Bone mineral density QTL 40 IDA RGD PMID:18707222 RGD:2300109 NCBI chr 1:221,901,238...266,901,238 JBrowse link
Q Bmd41 Bone mineral density QTL 41 IDA RGD PMID:18707222 RGD:2300109 NCBI chr 1:189,170,900...234,170,900 JBrowse link
Q Bmd43 Bone mineral density QTL 43 IDA RGD PMID:18707222 RGD:2300109 NCBI chr 1:189,170,900...234,170,900 JBrowse link
Q Bmd46 Bone mineral density QTL 46 IDA RGD PMID:18707222 RGD:2300109 NCBI chr 2:91,664,872...136,664,872 JBrowse link
Q Bmd47 Bone mineral density QTL 47 IDA RGD PMID:18707222 RGD:2300109 NCBI chr 2:20,641,371...65,641,371 JBrowse link
Q Bmd48 Bone mineral density QTL 48 IDA RGD PMID:18707222 RGD:2300109 NCBI chr 2:194,378,622...239,378,622 JBrowse link
Q Bmd50 Bone mineral density QTL 50 IDA RGD PMID:18707222 RGD:2300109 NCBI chr 4:61,975,371...106,975,371 JBrowse link
Q Bmd51 Bone mineral density QTL 51 IDA RGD PMID:18707222 RGD:2300109 NCBI chr 6:1...35,623,029 JBrowse link
Q Bmd52 Bone mineral density QTL 52 IDA RGD PMID:18707222 RGD:2300109 NCBI chr 6:1...35,623,029 JBrowse link
Q Bmd54 Bone mineral density QTL 54 IDA RGD PMID:18707222 RGD:2300109 NCBI chr 7:55,495,689...100,495,689 JBrowse link
Q Bmd55 Bone mineral density QTL 55 IDA RGD PMID:18707222 RGD:2300109 NCBI chr 8:83,894,304...128,894,304 JBrowse link
Q Bmd56 Bone mineral density QTL 56 IDA RGD PMID:18707222 RGD:2300109 NCBI chr 8:104,682,575...133,307,652 JBrowse link
Q Bmd57 Bone mineral density QTL 57 IDA RGD PMID:18707222 RGD:2300109 NCBI chr10:73,008,136...112,626,471 JBrowse link
Q Bmd6 Bone mineral density QTL 6 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 1:254,393...43,579,402 JBrowse link
Q Bmd60 Bone mineral density QTL 60 IDA RGD PMID:18707222 RGD:2300109 NCBI chr14:1...27,597,761 JBrowse link
Q Bmd61 Bone mineral density QTL 61 IDA RGD PMID:18707222 RGD:2300109 NCBI chr14:1...27,597,761 JBrowse link
Q Bmd63 Bone mineral density QTL 63 IDA RGD PMID:18707222 RGD:2300109 NCBI chr15:17,249,641...62,249,641 JBrowse link
Q Bmd65 Bone mineral density QTL 65 IDA RGD PMID:18707222 RGD:2300109 NCBI chr18:30,533,614...75,533,614 JBrowse link
Q Bmd67 Bone mineral density QTL 67 IDA RGD PMID:18707222 RGD:2300109 NCBI chr18:1...38,195,967 JBrowse link
Q Bmd68 Bone mineral density QTL 68 IDA RGD PMID:18707222 RGD:2300109 NCBI chr20:26,608,843...56,205,956 JBrowse link
Q Bmd7 Bone mineral density QTL 7 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 1:254,393...43,579,402 JBrowse link
Q Bmd8 Bone mineral density QTL 8 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 1:49,578,577...94,578,577 JBrowse link
Q Bmd88 Bone mineral density QTL 88 IDA RGD PMID:18282130 RGD:2293456 NCBI chr 9:27,486,036...63,264,281 JBrowse link
Q Bmd9 Bone mineral QTL density 9 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 2:9,444,679...49,615,930 JBrowse link
femur morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss10 Bone structure and strength QTL 10 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 1:49,578,577...169,852,184 JBrowse link
Q Bss11 Bone structure and strength QTL 11 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 2:118,446,646...227,707,979 JBrowse link
Q Bss111 Bone structure and strength QTL 111 IDA RGD PMID:16059631 RGD:1549683 NCBI chr 2:228,712,271...266,435,125 JBrowse link
Q Bss112 Bone structure and strength QTL 112 IDA RGD PMID:16059631 RGD:1549683 NCBI chr 5:112,279,412...157,279,412 JBrowse link
Q Bss113 Bone structure and strength QTL 113 IDA RGD PMID:26297441 RGD:11528619 NCBI chr 3:12,236,221...15,217,668 JBrowse link
Q Bss115 Bone structure and strength QTL 115 IDA RGD PMID:26297441 RGD:11528619 NCBI chr 8:87,295,037...88,257,646 JBrowse link
Q Bss116 Bone structure and strength QTL 116 IDA RGD PMID:26297441 RGD:11528619 NCBI chr10:45,114,283...45,744,081 JBrowse link
Q Bss12 Bone structure and strength QTL 12 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 4:56,092,756...101,092,756 JBrowse link
Q Bss120 Bone structure and strength QTL 120 IDA RGD PMID:26297441 RGD:11528619 NCBI chr17:81,940,459...82,621,764 JBrowse link
Q Bss121 Bone structure and strength QTL 121 IDA RGD PMID:26297441 RGD:11528619 NCBI chr20:35,276,651...37,867,728 JBrowse link
Q Bss14 Bone structure and strength QTL 14 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 4:87,136,446...132,136,446 JBrowse link
Q Bss16 Bone structure and strength QTL 16 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 6:6,161,722...76,002,731 JBrowse link
Q Bss17 Bone structure and strength QTL 17 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 9:1,907,834...15,555,026 JBrowse link
Q Bss19 Bone structure and strength QTL 19 IDA RGD PMID:16461031 RGD:1578307 NCBI chr15:26,381,041...106,550,657 JBrowse link
Q Bss20 Bone structure and strength QTL 20 IDA RGD PMID:16461031 RGD:1578307 NCBI chr18:15,695,872...87,080,053 JBrowse link
Q Bss21 Bone structure and strength QTL 21 IDA RGD PMID:16461031 RGD:1578307 NCBI chr18:15,695,872...87,080,053 JBrowse link
Q Bss22 Bone structure and strength QTL 22 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 1:189,170,900...234,170,900 JBrowse link
Q Bss23 Bone structure and strength QTL 23 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 6:1...43,665,660 JBrowse link
Q Bss24 Bone structure and strength QTL 24 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 7:55,495,689...100,495,689 JBrowse link
Q Bss25 Bone structure and strength QTL 25 IDA RGD PMID:18158281 RGD:2293455 NCBI chr10:73,008,136...112,626,471 JBrowse link
Q Bss26 Bone structure and strength QTL 26 IDA RGD PMID:18158281 RGD:2293455 NCBI chr13:71,230,858...114,033,958 JBrowse link
Q Bss27 Bone structure and strength QTL 27 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 1:189,170,900...234,170,900 JBrowse link
Q Bss28 Bone structure and strength QTL 28 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 6:1...43,665,660 JBrowse link
Q Bss29 Bone structure and strength QTL 29 IDA RGD PMID:18158281 RGD:2293455 NCBI chr15:17,249,641...62,249,641 JBrowse link
Q Bss3 Bone structure and strength QTL 3 IDA RGD PMID:16059631 RGD:1549683 NCBI chr 4:109,636,356...154,636,356 JBrowse link
Q Bss9 Bone structure and strength QTL 9 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 1:254,393...43,579,402 JBrowse link
femur size trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd29 Bone mineral density QTL 29 IDA RGD PMID:18282130 RGD:2293456 NCBI chr 7:55,495,689...100,495,689 JBrowse link
Q Bmd31 Bone mineral density QTL 31 IDA RGD PMID:18282130 RGD:2293456 NCBI chr17:4,716,067...27,691,136 JBrowse link
Q Bmd38 Bone mineral density QTL 38 IDA RGD PMID:18282130 RGD:2293456 NCBI chr 5:8,632,285...53,632,285 JBrowse link
Q Bmd90 Bone mineral density QTL 90 IDA RGD PMID:18282130 RGD:2293456 NCBI chr10:51,289,203...84,596,393 JBrowse link
Q Bmd91 Bone mineral density QTL 91 IDA RGD PMID:18282130 RGD:2293456 NCBI chr 9:27,486,155...88,333,183 JBrowse link
femur width term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss15 Bone structure and strength QTL 15 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 4:87,136,446...132,136,446 JBrowse link
Q Bss18 Bone structure and strength QTL 18 IDA RGD PMID:16461031 RGD:1578307 NCBI chr10:100,155,035...110,992,275 JBrowse link
forelimb integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Plsm1 Polydactyly-luxate syndrome (PLS) morphotypes QTL 1 IDA RGD PMID:8997636 RGD:632346 NCBI chr 4:1...25,545,519 JBrowse link
Q Plsm4 Polydactyly-luxate syndrome (PLS) morphotypes QTL 4 IDA RGD PMID:8997636 RGD:632346 NCBI chr11:57,858,810...90,463,843 JBrowse link
hindlimb integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Plsm2 Polydactyly-luxate syndrome (PLS) morphotypes QTL 2 IDA RGD PMID:8997636 RGD:632346 NCBI chr 4:131,834,282...176,834,282 JBrowse link
hypodermis integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Cari1 Carrageenan-induced inflammation QTL 1 IDA RGD PMID:10087293 RGD:69693 NCBI chr10:55,678,976...112,626,471 JBrowse link
Q Cari2 Carrageenan-induced inflammation QTL 2 IDA RGD PMID:10087293 RGD:69693 NCBI chr 2:147,522,550...217,498,710 JBrowse link
lens clarity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Arrd3 Age-related retinal degeneration QTL 3 IDA RGD PMID:22300709 RGD:7794750 NCBI chr 1:202,571,665...264,802,994 JBrowse link
Q Lecl1 Lens clarity QTL 1 IDA RGD PMID:11252169 RGD:68701 NCBI chr 8:21,464,919...91,140,553 JBrowse link
Q Lecl2 Lens clarity QTL 2 IDA RGD PMID:11252169 RGD:68701 NCBI chr15:39,480,797...62,596,410 JBrowse link
long bone metaphysis morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss59 Bone structure and strength QTL 59 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 5:3,251,329...26,252,076 JBrowse link
Q Bss65 Bone structure and strength QTL 65 IDA RGD PMID:19113924 RGD:2312767 NCBI chr15:68,366,508...81,255,430 JBrowse link
Q Bss71 Bone structure and strength QTL 71 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:124,090,312...169,090,312 JBrowse link
Q Bss85 Bone structure and strength QTL 85 IDA RGD PMID:19113924 RGD:2312767 NCBI chr18:14,678,852...59,678,852 JBrowse link
retinal layer morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Arrd1 Age-related retinal degeneration QTL 1 IDA RGD PMID:22300709 RGD:7794750 NCBI chr 1:106,002,252...202,571,904 JBrowse link
Q Arrd2 Age-related retinal degeneration QTL 2 IDA RGD PMID:22300709 RGD:7794750 NCBI chr 1:202,571,665...264,802,994 JBrowse link
subcutaneous adipose mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scfw1 Subcutaneous fat weight QTL 1 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 2:197,253,963...242,253,963 JBrowse link
Q Scfw2 Subcutaneous fat weight QTL 2 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 4:1...28,352,196 JBrowse link
Q Scfw3 Subcutaneous fat weight QTL 3 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 6:1...42,388,212 JBrowse link
Q Scfw4 Subcutaneous fat weight QTL 4 IDA RGD PMID:25003539 RGD:8694157
Q Scfw5 Subcutaneous fat weight QTL 5 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 9:1...40,383,872 JBrowse link
Q Scfw6 Subcutaneous fat weight QTL 6 IDA RGD PMID:25003539 RGD:8694157
tibia area term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss100 Bone structure and strength QTL 100 IDA RGD PMID:21818327 RGD:5684953 NCBI chr 8:54,065,044...89,058,369 JBrowse link
Q Bss104 Bone structure and strength QTL 104 IDA RGD PMID:21818327 RGD:5684953 NCBI chr  X:121,442,246...134,627,946 JBrowse link
Q Bss54 Bone structure and strength QTL 54 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,579,208...126,240,667 JBrowse link
Q Bss61 Bone structure and strength QTL 61 IDA RGD PMID:19113924 RGD:2312767 NCBI chr10:5,460,119...21,524,070 JBrowse link
Q Bss67 Bone structure and strength QTL 67 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,314,489...83,657,083 JBrowse link
Q Bss72 Bone structure and strength QTL 72 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 3:28,136,728...51,687,917 JBrowse link
Q Bss86 Bone structure and strength QTL 86 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 1:53,851,348...83,657,083 JBrowse link
Q Bss87 Bone structure and strength QTL 87 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 1:53,851,348...83,657,083 JBrowse link
Q Bss90 Bone structure and strength QTL 90 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 9:92,741,297...98,606,834 JBrowse link
Q Bss91 Bone structure and strength QTL 91 IDA RGD PMID:20699128 RGD:4889918 NCBI chr10:85,513,822...95,638,337 JBrowse link
Q Bss92 Bone structure and strength QTL 92 IDA RGD PMID:20699128 RGD:4889918 NCBI chr14:87,458,772...106,641,756 JBrowse link
Q Bss94 Bone structure and strength QTL 94 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 1:49,547,328...83,657,083 JBrowse link
Q Bss95 Bone structure and strength QTL 95 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 3:1...37,891,710 JBrowse link
Q Bss99 Bone structure and strength QTL 99 IDA RGD PMID:21818327 RGD:5684953
tibia length term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss51 Bone structure and strength QTL 51 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:1...34,993,530 JBrowse link
Q Bss53 Bone structure and strength QTL 53 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,579,208...126,240,667 JBrowse link
Q Bss60 Bone structure and strength QTL 60 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 8:54,065,044...89,058,369 JBrowse link
Q Bss66 Bone structure and strength QTL 66 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,314,489...83,657,083 JBrowse link
Q Lmblg1 Limb length QTL 1 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 1:161,784,169...219,232,156 JBrowse link
Q Lmblg2 Limb length QTL 2 IDA RGD PMID:15452030 RGD:1302893 NCBI chr17:3,336,972...73,413,148 JBrowse link
Q Plsm3 Polydactyly-luxate syndrome (PLS) morphotypes QTL 3 IDA RGD PMID:8997636 RGD:632346 NCBI chr 7:1...37,009,673 JBrowse link
tibia mineral mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd69 Bone mineral density QTL 69 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:1...34,993,530 JBrowse link
Q Bmd70 Bone mineral density QTL 70 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,579,208...126,240,667 JBrowse link
Q Bmd71 Bone mineral density QTL 71 IDA RGD PMID:19113924 RGD:2312767 NCBI chr10:5,460,119...21,524,070 JBrowse link
Q Bmd72 Bone mineral density QTL 72 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,314,489...83,657,083 JBrowse link
Q Bmd73 Bone mineral density QTL 73 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,314,489...83,657,083 JBrowse link
Q Bmd74 Bone mineral density QTL 74 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:83,656,882...126,240,667 JBrowse link
Q Bmd75 Bone mineral density QTL 75 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 2:231,224,020...254,132,424 JBrowse link
Q Bmd76 Bone mineral density QTL 76 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 3:28,136,728...51,687,917 JBrowse link
Q Bmd77 Bone mineral density QTL 77 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 3:28,136,728...51,687,917 JBrowse link
Q Bmd78 Bone mineral density QTL 78 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 5:150,360,936...167,946,134 JBrowse link
Q Bmd79 Bone mineral density QTL 79 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 7:103,815,550...126,525,386 JBrowse link
Q Bmd80 Bone mineral density QTL 80 IDA RGD PMID:19113924 RGD:2312767 NCBI chr10:19,958,696...21,524,070 JBrowse link
Q Bmd81 Bone mineral density QTL 81 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 3:39,773,247...51,687,917 JBrowse link
Q Bmd82 Bone mineral density QTL 82 IDA RGD PMID:21818327 RGD:5684953 NCBI chr 2:60,325,352...106,432,915 JBrowse link
Q Bmd83 Bone mineral density QTL 82 IDA RGD PMID:21818327 RGD:5684953
Q Bmd84 Bone mineral density QTL 84 IDA RGD PMID:21818327 RGD:5684953 NCBI chr 8:46,588,437...54,065,241 JBrowse link
Q Bmd85 Bone mineral density QTL 85 IDA RGD PMID:21818327 RGD:5684953 NCBI chr 2:60,325,352...106,432,915 JBrowse link
Q Bmd86 Bone mineral density QTL 86 IDA RGD PMID:21818327 RGD:5684953 NCBI chr 4:55,324,857...79,575,658 JBrowse link
Q Bmd87 Bone mineral density QTL 87 IDA RGD PMID:21818327 RGD:5684953 NCBI chr 4:55,324,857...79,575,658 JBrowse link
Q Bmd92 Bone mineral density QTL 92 IDA RGD PMID:27113531 RGD:11353859 NCBI chr 9:95,430,880...97,679,852 JBrowse link
tibia size trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss55 Bone structure and strength QTL 55 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,579,208...126,240,667 JBrowse link
Q Bss56 Bone structure and strength QTL 56 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,579,208...126,240,667 JBrowse link
Q Bss62 Bone structure and strength QTL 62 IDA RGD PMID:19113924 RGD:2312767 NCBI chr10:5,460,119...21,524,070 JBrowse link
Q Bss68 Bone structure and strength QTL 68 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,314,489...83,657,083 JBrowse link
Q Bss73 Bone structure and strength QTL 73 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 3:28,136,728...51,687,917 JBrowse link
Q Bss76 Bone structure and strength QTL 76 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 8:33,558,660...89,058,369 JBrowse link
Q Bss77 Bone structure and strength QTL 77 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 8:33,558,660...89,058,369 JBrowse link
Q Bss79 Bone structure and strength QTL 79 IDA RGD PMID:19113924 RGD:2312767 NCBI chr10:65,992,275...110,992,275 JBrowse link
Q Bss82 Bone structure and strength QTL 82 IDA RGD PMID:19113924 RGD:2312767 NCBI chr14:40,315,610...85,315,610 JBrowse link
Q Bss83 Bone structure and strength QTL 83 IDA RGD PMID:19113924 RGD:2312767 NCBI chr14:40,315,610...85,315,610 JBrowse link
Q Bss88 Bone structure and strength QTL 88 IDA RGD PMID:20699128 RGD:4889918
Q Bss89 Bone structure and strength QTL 89 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 8:54,065,044...89,058,369 JBrowse link
Q Bss93 Bone structure and strength QTL 93 IDA RGD PMID:20699128 RGD:4889918 NCBI chr17:27,690,959...63,994,435 JBrowse link
Q Bss96 Bone structure and strength QTL 96 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 4:55,324,857...79,575,658 JBrowse link
Q Bss97 Bone structure and strength QTL 97 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 4:55,324,857...79,575,658 JBrowse link
uvea integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Eau1 Experimental allergic uveoretinitis QTL 1 IDA RGD PMID:10323205 RGD:61073 NCBI chr 4:70,773,471...132,455,556 JBrowse link
Q Eau2 Experimental allergic uveoretinitis QTL 2 IDA RGD PMID:10323205 RGD:61073 NCBI chr12:10,256,890...31,723,732 JBrowse link
Q Eau3 Experimental allergic uveoretinitis QTL 3 IDA RGD PMID:10323205 RGD:61073 NCBI chr10:35,669,465...46,851,407 JBrowse link
Q Eau4 Experimental allergic uveoretinitis QTL 4 IDA RGD PMID:18453595 RGD:2296064 NCBI chr 3:146,232,777...177,699,992 JBrowse link
Q Eau5 Experimental allergic uveoretinitis QTL 5 IDA RGD PMID:18453595 RGD:2296064 NCBI chr 2:217,498,545...254,132,424 JBrowse link
Q Eau6 Experimental allergic uveoretinitis QTL 6 IDA RGD PMID:18453595 RGD:2296064 NCBI chr 7:93,726,906...138,726,906 JBrowse link
Q Eau7 Experimental allergic uveoretinitis QTL 7 IDA RGD PMID:18453595 RGD:2296064 NCBI chr10:35,669,573...36,185,929 JBrowse link
Q Eau8 Experimental allergic uveoretinitis QTL 8 IDA RGD PMID:18453595 RGD:2296064 NCBI chr19:21,407,787...62,275,575 JBrowse link
Q Eau9 Experimental allergic uveoretinitis QTL 9 IDA RGD PMID:18453595 RGD:2296064 NCBI chr10:68,305,037...85,514,044 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  vertebrate trait 2379
    organism subdivision trait 180
      surface structure trait 180
        surface structure morphology trait 180
          appendage morphology trait + 142
          beak morphology trait 0
          cloaca morphology trait 0
          ear morphology trait + 0
          eye morphology trait + 14
          integumentary system morphology trait + 24
          lip morphology trait + 0
          nose morphology trait + 0
          opercular flap morphology trait 0
          snout morphology trait + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.