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Ontology Browser

Term:
initiator_codon_variant (SO:0001582)
Annotations: Rat: (0) Mouse: (0) Human: (0) Chinchilla: (0) Bonobo: (0) Dog: (0) Squirrel: (0) Pig: (0)
Parent Terms Term With Siblings Child Terms
initiator codon variant +  
A codon variant that changes at least one base of the first codon of a transcript.
protein altering variant +  
synonymous variant +  
terminator codon variant +  

Synonyms
Exact Synonyms: Jannovar:initiator_codon_variant ;   VAT:startOverlap ;   initiatior codon variant ;   initiator codon change
Related Synonyms: snpEff:NON_SYNONYMOUS_START
Xrefs: EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html ;   http://snpeff.sourceforge.net/SnpEff_manual.html ;   http://vat.gersteinlab.org/formats.php "VAT" ;   loinc:LA6695-6 "Initiating Methionine"
Definition Sources: SO:ke

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.