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Ontology Browser

Term:
Parent Terms Term With Siblings Child Terms
coding transcript variant +  
complex transcript variant 
exon variant +  
incomplete transcript variant +  
intragenic variant 
intron variant +  
A transcript variant occurring within an intron.
NMD transcript variant 
non coding transcript variant +  
splicing variant +  
transcript secondary structure variant +  

Synonyms
Exact Synonyms: Jannovar:intron_variant ;   Seattleseq:intron ;   VAAST:intron_variant ;   VEP:intron_variant ;   intron variant ;   intron_ ;   intronic ;   snpEff:INTRON
Related Synonyms: ANNOVAR:intronic ;   Seattleseq:intron-near-splice
Xrefs: http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp "Seattleseq" ;   http://snpeff.sourceforge.net/SnpEff_manual.html ;   http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences
Definition Sources: SO:ke

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.