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GENE - TERM ANNOTATION REPORT

5 Annotations Found.

An association has been curated linking Plod1 and procollagen-lysine 5-dioxygenase activity in Rattus norvegicus.        

  • The association was inferred from mutant phenotype (IMP)
  •  
  • The annotation was made from Samimi A and Last JA, Toxicol Appl Pharmacol. 2001 Nov 1;176(3):181-6.
  • 7 additional annotations were made from Samimi A and Last JA, Toxicol Appl Pharmacol. 2001 Nov 1;176(3):181-6.
  • 3 CRRD objects have been annotated to procollagen-lysine 5-dioxygenase activity  (GO:0008475)
  • 16 papers in CRRD have been used to annotate Plod1


  • An association has been curated linking Plod1 and procollagen-lysine 5-dioxygenase activity in Rattus norvegicus.        

  • The association was inferred from direct assay (IDA)
  •  
  • The annotation was made from Samimi A and Last JA, Toxicol Appl Pharmacol. 2001 Nov 1;176(3):181-6.
  • 7 additional annotations were made from Samimi A and Last JA, Toxicol Appl Pharmacol. 2001 Nov 1;176(3):181-6.
  • 3 CRRD objects have been annotated to procollagen-lysine 5-dioxygenase activity  (GO:0008475)
  • 16 papers in CRRD have been used to annotate Plod1


  • An association has been curated linking Plod1 and procollagen-lysine 5-dioxygenase activity in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with PLOD1 (Homo sapiens)
  • 3 CRRD objects have been annotated to procollagen-lysine 5-dioxygenase activity  (GO:0008475)
  • 16 papers in CRRD have been used to annotate Plod1
  • Curation Notes: (PMID:10934207), (PMID:8621606), (PMID:9724729)
  • Original References(s): PMID:10934207, PMID:8621606, PMID:9724729


  • An association has been curated linking Plod1 and procollagen-lysine 5-dioxygenase activity in Rattus norvegicus.        

  • The association was inferred from biological aspect of ancestor (IBA)
  •  
  • The annotation was made from Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
  • The annotation has been inferred from biological aspect of ancestor with MGI:MGI:1347008 & PANTHER:PTN000842962 & Plod1 (Rattus norvegicus) & UniProtKB:O00469 & UniProtKB:O60568 & UniProtKB:Q02809 & ZFIN:ZDB-GENE-070326-1
  • 71267 additional annotations were made from Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
  • 3 CRRD objects have been annotated to procollagen-lysine 5-dioxygenase activity  (GO:0008475)
  • 16 papers in CRRD have been used to annotate Plod1
  • Curation Notes: PMID:21873635


  • An association has been curated linking Plod1 and procollagen-lysine 5-dioxygenase activity in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
  •  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from electronic annotation with EC:1.14.11.4
  • 3 CRRD objects have been annotated to procollagen-lysine 5-dioxygenase activity  (GO:0008475)
  • 16 papers in CRRD have been used to annotate Plod1
  • Curation Notes: GO_REF:0000003
  • Original References(s): GO_REF:0000003


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    RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.