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GENE - TERM ANNOTATION REPORT

4 Annotations Found.

An association has been curated linking Plod3 and procollagen-lysine 5-dioxygenase activity in Rattus norvegicus.        

  • The association was inferred from biological aspect of ancestor (IBA)
  •  
  • The annotation was made from Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
  • The annotation has been inferred from biological aspect of ancestor with MGI:1347008 & PANTHER:PTN000842962 & Plod1 (Rattus norvegicus) & UniProtKB:O00469 & UniProtKB:O60568 & UniProtKB:Q02809 & ZFIN:ZDB-GENE-070326-1
  • 71311 additional annotations were made from Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
  • 3 CRRD objects have been annotated to procollagen-lysine 5-dioxygenase activity  (GO:0008475)
  • 10 papers in CRRD have been used to annotate Plod3
  • Curation Notes: PMID:21873635


  • An association has been curated linking Plod3 and procollagen-lysine 5-dioxygenase activity in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with PLOD3 (Homo sapiens)
  • 3 CRRD objects have been annotated to procollagen-lysine 5-dioxygenase activity  (GO:0008475)
  • 10 papers in CRRD have been used to annotate Plod3
  • Curation Notes: (PMID:10934207), (PMID:18298658), (PMID:9582318), (PMID:9724729)
  • Original References(s): PMID:10934207, PMID:18298658, PMID:9582318, PMID:9724729


  • An association has been curated linking Plod3 and procollagen-lysine 5-dioxygenase activity in Rattus norvegicus.        

  • The association was inferred from sequence or structural similarity (ISS)
  •  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from sequence or structural similarity with UniProtKB:O60568
  • 3 CRRD objects have been annotated to procollagen-lysine 5-dioxygenase activity  (GO:0008475)
  • 10 papers in CRRD have been used to annotate Plod3
  • Curation Notes: GO_REF:0000024
  • Original References(s): GO_REF:0000024


  • An association has been curated linking Plod3 and procollagen-lysine 5-dioxygenase activity in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with Plod3 (Mus musculus)
  • 3 CRRD objects have been annotated to procollagen-lysine 5-dioxygenase activity  (GO:0008475)
  • 10 papers in CRRD have been used to annotate Plod3
  • Curation Notes: (MGI:3618677|PMID:16467571), (MGI:6202004|PMID:16447251)
  • Original References(s): MGI:3618677, MGI:6202004, PMID:16447251, PMID:16467571


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    RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.