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GENE - TERM ANNOTATION REPORT

10 Annotations Found.

An association has been curated linking Nr1h4 and bile acid signaling pathway in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with Nr1h4 (Mus musculus)
  • 19 CRRD objects have been annotated to bile acid signaling pathway  (GO:0038183)
  • 70 papers in CRRD have been used to annotate Nr1h4
  • Curation Notes: (MGI:MGI:5306122|PMID:21757002)
  • Original References(s): MGI:MGI:5306122, PMID:21757002


  • An association has been curated linking Nr1h4 and bile acid signaling pathway in Rattus norvegicus.        

  • The association was inferred from expression pattern (IEP)
  •  
  • The annotation was made from Han H, etal., Cell Physiol Biochem. 2018;49(4):1304-1319. doi: 10.1159/000493409. Epub 2018 Sep 17.
  • 39 additional annotations were made from Han H, etal., Cell Physiol Biochem. 2018;49(4):1304-1319. doi: 10.1159/000493409. Epub 2018 Sep 17.
  • 19 CRRD objects have been annotated to bile acid signaling pathway  (GO:0038183)
  • 70 papers in CRRD have been used to annotate Nr1h4


  • An association has been curated linking Nr1h4 and bile acid signaling pathway in Rattus norvegicus.        

  • The association was inferred from expression pattern (IEP)
  •  
  • The annotation was made from Côté I, etal., Br J Nutr. 2014 Nov 28;112(10):1592-600. doi: 10.1017/S0007114514002517. Epub 2014 Sep 29.
  • 100 additional annotations were made from Côté I, etal., Br J Nutr. 2014 Nov 28;112(10):1592-600. doi: 10.1017/S0007114514002517. Epub 2014 Sep 29.
  • 19 CRRD objects have been annotated to bile acid signaling pathway  (GO:0038183)
  • 70 papers in CRRD have been used to annotate Nr1h4


  • An association has been curated linking Nr1h4 and bile acid signaling pathway in Rattus norvegicus.        

  • The association was inferred from expression pattern (IEP)
  •  
  • The annotation was made from Jia WJ, etal., Mol Med Rep. 2018 Jan;17(1):1545-1554. doi: 10.3892/mmr.2017.8025. Epub 2017 Nov 10.
  • 6 additional annotations were made from Jia WJ, etal., Mol Med Rep. 2018 Jan;17(1):1545-1554. doi: 10.3892/mmr.2017.8025. Epub 2017 Nov 10.
  • 19 CRRD objects have been annotated to bile acid signaling pathway  (GO:0038183)
  • 70 papers in CRRD have been used to annotate Nr1h4


  • An association has been curated linking Nr1h4 and bile acid signaling pathway in Rattus norvegicus.        

  • The association was inferred from mutant phenotype (IMP)
  •  
  • The annotation was made from Qu X, etal., Biol Pharm Bull. 2018;41(8):1211-1218. doi: 10.1248/bpb.b18-00028.
  • 8 additional annotations were made from Qu X, etal., Biol Pharm Bull. 2018;41(8):1211-1218. doi: 10.1248/bpb.b18-00028.
  • 19 CRRD objects have been annotated to bile acid signaling pathway  (GO:0038183)
  • 70 papers in CRRD have been used to annotate Nr1h4


  • An association has been curated linking Nr1h4 and bile acid signaling pathway in Rattus norvegicus.        

  • The association was inferred from direct assay (IDA)
  •  
  • The annotation was made from Yang F, etal., Br J Pharmacol. 2018 Mar;175(5):810-829. doi: 10.1111/bph.14126. Epub 2018 Jan 25.
  • 23 additional annotations were made from Yang F, etal., Br J Pharmacol. 2018 Mar;175(5):810-829. doi: 10.1111/bph.14126. Epub 2018 Jan 25.
  • 19 CRRD objects have been annotated to bile acid signaling pathway  (GO:0038183)
  • 70 papers in CRRD have been used to annotate Nr1h4


  • An association has been curated linking Nr1h4 and bile acid signaling pathway in Rattus norvegicus.        

  • The association was inferred from mutant phenotype (IMP)
  •  
  • The annotation was made from Evans MJ, etal., Am J Physiol Gastrointest Liver Physiol. 2009 Mar;296(3):G543-52. doi: 10.1152/ajpgi.90585.2008. Epub 2009 Jan 8.
  • 3 additional annotations were made from Evans MJ, etal., Am J Physiol Gastrointest Liver Physiol. 2009 Mar;296(3):G543-52. doi: 10.1152/ajpgi.90585.2008. Epub 2009 Jan 8.
  • 19 CRRD objects have been annotated to bile acid signaling pathway  (GO:0038183)
  • 70 papers in CRRD have been used to annotate Nr1h4


  • An association has been curated linking Nr1h4 and bile acid signaling pathway in Rattus norvegicus.        

  • The association was inferred from expression pattern (IEP)
  •  
  • The annotation was made from Wu SY, etal., Acta Pharmacol Sin. 2018 Dec;39(12):1865-1873. doi: 10.1038/s41401-018-0110-y. Epub 2018 Jul 30.
  • 10 additional annotations were made from Wu SY, etal., Acta Pharmacol Sin. 2018 Dec;39(12):1865-1873. doi: 10.1038/s41401-018-0110-y. Epub 2018 Jul 30.
  • 19 CRRD objects have been annotated to bile acid signaling pathway  (GO:0038183)
  • 70 papers in CRRD have been used to annotate Nr1h4


  • An association has been curated linking Nr1h4 and bile acid signaling pathway in Rattus norvegicus.        

  • The association was inferred from expression pattern (IEP)
  •  
  • The annotation was made from Li X, etal., Arch Toxicol. 2017 Jan;91(1):481-494. doi: 10.1007/s00204-016-1697-8. Epub 2016 Apr 18.
  • 147 additional annotations were made from Li X, etal., Arch Toxicol. 2017 Jan;91(1):481-494. doi: 10.1007/s00204-016-1697-8. Epub 2016 Apr 18.
  • 19 CRRD objects have been annotated to bile acid signaling pathway  (GO:0038183)
  • 70 papers in CRRD have been used to annotate Nr1h4


  • An association has been curated linking Nr1h4 and bile acid signaling pathway in Rattus norvegicus.        

  • The association was inferred from biological aspect of ancestor (IBA)
  •  
  • The annotation was made from Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
  • The annotation has been inferred from biological aspect of ancestor with MGI:MGI:1352464 & PANTHER:PTN002786623 & Nr1h4 (Rattus norvegicus) & UniProtKB:Q96RI1
  • 71484 additional annotations were made from Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
  • 19 CRRD objects have been annotated to bile acid signaling pathway  (GO:0038183)
  • 70 papers in CRRD have been used to annotate Nr1h4
  • Curation Notes: PMID:21873635


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    RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.