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Gene: Col12a1 (collagen, type XII, alpha 1) Mus musculus
Symbol: Col12a1
Name: collagen, type XII, alpha 1
Description: Predicted to have extracellular matrix structural constituent conferring tensile strength. Predicted to be involved in endodermal cell differentiation and growth plate cartilage chondrocyte morphogenesis. Localizes to the collagen-containing extracellular matrix and extracellular space. Human ortholog(s) of this gene implicated in Ullrich congenital muscular dystrophy. Is expressed in several structures, including connective tissue; mitral valve; sensory organ; skeleton; and skin. Orthologous to human COL12A1 (collagen type XII alpha 1 chain); PARTICIPATES IN syndecan signaling pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,2',4,4',5,5'-hexachlorobiphenyl; 2,2',5,5'-tetrachlorobiphenyl.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AW743884; collagen alpha-1(XII) chain; procollagen, type XII, alpha 1
Homo sapiens (human) : COL12A1 (collagen type XII alpha 1 chain)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Col12a1 (collagen type XII alpha 1 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col12a1 (collagen type XII alpha 1 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL12A1 (collagen type XII alpha 1 chain)
Canis lupus familiaris (dog) : COL12A1 (collagen type XII alpha 1 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col12a1 (collagen type XII alpha 1 chain)
Sus scrofa (pig) : COL12A1 (collagen type XII alpha 1 chain)
Chlorocebus sabaeus (African green monkey) : COL12A1 (collagen type XII alpha 1 chain)
Heterocephalus glaber (naked mole-rat) : Col12a1 (collagen type XII alpha 1 chain)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
GRCm38 Ensembl979,598,991 - 79,718,831 (-)Ensembl
GRCm38979,598,987 - 79,721,141 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv37979,446,798 - 79,566,485 (-)NCBIGRCm37mm9NCBIm37
MGSCv36979,387,443 - 79,504,149 (-)NCBImm8
Celera976,744,484 - 76,862,867 (-)NCBICelera
Cytogenetic Map9 E1NCBI
cM Map943.82NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status



Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
More on Col12a1
Alliance Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 10372
Created: 2000-05-25
Species: Mus musculus
Last Modified: 2019-11-27
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.