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Gene: Hoxa2 (homeobox A2) Rattus norvegicus
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Symbol: Hoxa2
Name: homeobox A2
Description: Predicted to have DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including embryonic organ morphogenesis; nervous system development; and regionalization. Predicted to localize to nucleoplasm. Orthologous to human HOXA2 (homeobox A2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; acrylamide.
Type: protein-coding
RefSeq Status: MODEL
Also known as: homeobox A2-like; homeobox protein Hox-A2; Hoxa2l; NEWGENE_2813
Orthologs:
Homo sapiens (human) : HOXA2 (homeobox A2)  HGNC  Alliance
Mus musculus (house mouse) : Hoxa2 (homeobox A2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxa2 (homeobox A2)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXA2 (homeobox A2)
Canis lupus familiaris (dog) : HOXA2 (homeobox A2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxa2 (homeobox A2)
Sus scrofa (pig) : HOXA2 (homeobox A2)
Chlorocebus sabaeus (African green monkey) : HOXA2 (homeobox A2)
Heterocephalus glaber (naked mole-rat) : Hoxa2 (homeobox A2)
more info ...
Is Marker For: QTLs:   Sach7  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0482,130,441 - 82,134,846 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl482,131,329 - 82,133,605 (-)EnsemblRnor6.0rn6Rnor6.0
Celera476,153,207 - 76,157,522 (-)NCBICelera
Cytogenetic Map4q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Hoxa2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 11468112
Created: 2016-08-02
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.