ARTN (artemin) - Chinchilla Research Resource Database
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Gene: ARTN (artemin) Pan paniscus
Analyze
Symbol: ARTN
Name: artemin
CRRD ID: 11890211
Description: ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); induction of positive chemotaxis (ortholog); lymphocyte migration into lymphoid organs (ortholog); ASSOCIATED WITH acoustic neuroma (ortholog); Animal Disease Models (ortholog); atopic dermatitis (ortholog); FOUND IN extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOW QUALITY PROTEIN: artemin
Orthologs:
Homo sapiens (human) : ARTN (artemin)  HGNC  Alliance
Mus musculus (house mouse) : Artn (artemin)  MGI  Alliance
Rattus norvegicus (Norway rat) : Artn (artemin)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Artn (artemin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Artn (artemin)
Sus scrofa (pig) : ARTN (artemin)
Chlorocebus sabaeus (African green monkey) : ARTN (artemin)
Heterocephalus glaber (naked mole-rat) : Artn (artemin)
more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1144,604,514 - 44,610,643 (+)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v0143,233,097 - 43,239,044 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
ARTN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1144,604,514 - 44,610,643 (+)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v0143,233,097 - 43,239,044 (+)NCBI
ARTN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl143,933,320 - 43,937,240 (+)EnsemblGRCh38hg38GRCh38
GRCh38143,933,801 - 43,937,240 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37144,398,992 - 44,402,912 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36144,171,579 - 44,175,471 (+)NCBINCBI36hg18NCBI36
Build 34144,070,746 - 44,071,977NCBI
Celera142,682,525 - 42,686,445 (+)NCBI
Cytogenetic Map1p34.1NCBI
HuRef142,517,866 - 42,521,786 (+)NCBIHuRef
CHM1_1144,515,224 - 44,519,144 (+)NCBICHM1_1
Artn
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394117,783,105 - 117,787,993 (-)NCBI
GRCm384117,925,908 - 117,930,795 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4117,926,162 - 117,929,763 (-)EnsemblGRCm38mm10GRCm38
MGSCv374117,598,767 - 117,602,368 (-)NCBIGRCm37mm9NCBIm37
MGSCv364117,424,094 - 117,427,695 (-)NCBImm8
Celera4116,641,832 - 116,645,434 (-)NCBICelera
Cytogenetic Map4D2.1NCBI
Artn
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05136,759,717 - 136,765,036 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5136,759,717 - 136,762,986 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05140,548,766 - 140,554,035 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45138,390,981 - 138,394,250 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15138,396,703 - 138,397,079 (-)NCBI
Celera5130,012,959 - 130,016,228 (-)NCBICelera
Cytogenetic Map5q36NCBI
Artn
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555373,460,176 - 3,464,335 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555373,460,176 - 3,464,335 (+)NCBIChiLan1.0ChiLan1.0
Artn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_00493647425,252,510 - 25,254,221 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARTN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6167,357,662 - 167,358,674 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16167,356,363 - 167,361,370 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26154,725,018 - 154,726,492 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ARTN
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl2088,869,941 - 88,871,049 (-)Ensembl
ChlSab1.12088,869,463 - 88,874,036 (-)NCBI
Artn
(Heterocephalus glaber - naked mole-rat)
No map positions available.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_034963220   ⟹   XP_034819111
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0143,233,097 - 43,239,044 (+)NCBI
RefSeq Acc Id: XM_034963228   ⟹   XP_034819119
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0143,233,097 - 43,239,044 (+)NCBI
RefSeq Acc Id: XM_034963229   ⟹   XP_034819120
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0143,233,097 - 43,239,044 (+)NCBI
RefSeq Acc Id: XM_034963235   ⟹   XP_034819126
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0143,233,097 - 43,239,044 (+)NCBI
RefSeq Acc Id: XM_034963240   ⟹   XP_034819131
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0143,233,097 - 43,239,044 (+)NCBI
RefSeq Acc Id: XM_034963241   ⟹   XP_034819132
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0143,233,097 - 43,239,044 (+)NCBI
RefSeq Acc Id: XM_034963246   ⟹   XP_034819137
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0143,233,097 - 43,239,044 (+)NCBI
RefSeq Acc Id: XM_034963256   ⟹   XP_034819147
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0143,233,097 - 43,239,044 (+)NCBI
Reference Sequences
RefSeq Acc Id: XP_034819111   ⟸   XM_034963220
- Peptide Label: isoform X1
RefSeq Acc Id: XP_034819120   ⟸   XM_034963229
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034819132   ⟸   XM_034963241
- Peptide Label: isoform X3
RefSeq Acc Id: XP_034819119   ⟸   XM_034963228
- Peptide Label: isoform X1
RefSeq Acc Id: XP_034819131   ⟸   XM_034963240
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034819147   ⟸   XM_034963256
- Peptide Label: isoform X3
RefSeq Acc Id: XP_034819126   ⟸   XM_034963235
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034819137   ⟸   XM_034963246
- Peptide Label: isoform X3


Additional Information

Database Acc Id Source(s)
NCBI Gene ARTN ENTREZGENE

 



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.