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Gene: COL2A1 (collagen type II alpha 1 chain) Canis lupus familiaris
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Symbol: COL2A1
Name: collagen type II alpha 1 chain
Description: ENCODES a protein that exhibits identical protein binding (inferred); MHC class II protein binding (inferred); platelet-derived growth factor binding (inferred); INVOLVED IN anterior head development (inferred); cartilage condensation (inferred); cartilage development involved in endochondral bone morphogenesis (inferred); PARTICIPATES IN cell-extracellular matrix signaling pathway; Entamoebiasis pathway; syndecan signaling pathway; ASSOCIATED WITH achondrogenesis type II (ortholog); Animal Disease Models (ortholog); arthritis (ortholog); FOUND IN basement membrane (inferred); cytoplasm (inferred)
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: collagen alpha-1(II) chain; collagen, type II, alpha 1 (primary osteoarthritis, spondyloepiphyseal dysplasia, congenital); type II collagen
Orthologs:
Homo sapiens (human) : COL2A1 (collagen type II alpha 1 chain)  HGNC  Alliance
Mus musculus (house mouse) : Col2a1 (collagen, type II, alpha 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Col2a1 (collagen type II alpha 1 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col2a1 (collagen type II alpha 1 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL2A1 (collagen type II alpha 1 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col2a1 (collagen type II alpha 1 chain)
Sus scrofa (pig) : COL2A1 (collagen type II alpha 1 chain)
Chlorocebus sabaeus (African green monkey) : COL2A1 (collagen type II alpha 1 chain)
Heterocephalus glaber (naked mole-rat) : Col2a1 (collagen type II alpha 1 chain)
more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl276,756,994 - 6,787,733 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1276,756,994 - 6,787,733 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - uncurated

Genomics

Comparative Map Data

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
 
More on COL2A1
NCBI Gene
Ensembl Gene
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 12235626
Created: 2017-01-24
Species: Canis lupus familiaris
Last Modified: 2020-02-26
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.