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Gene: Col5a1 (collagen type V alpha 1 chain) Ictidomys tridecemlineatus
Symbol: Col5a1
Name: collagen type V alpha 1 chain
CRRD ID: 12638037
Description: ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); heparin binding (ortholog); platelet-derived growth factor binding (ortholog); INVOLVED IN blood vessel development (ortholog); cell adhesion (ortholog); cell migration (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH alopecia (ortholog); Animal Mammary Neoplasms (ortholog); Ankyloblepharon Filiforme Adnatum (ortholog); FOUND IN basement membrane (ortholog); collagen trimer (ortholog); collagen type V trimer (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: collagen alpha-1(V) chain
Homo sapiens (human) : COL5A1 (collagen type V alpha 1 chain)  HGNC  Alliance
Mus musculus (house mouse) : Col5a1 (collagen, type V, alpha 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Col5a1 (collagen type V alpha 1 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col5a1 (collagen type V alpha 1 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL5A1 (collagen type V alpha 1 chain)
Canis lupus familiaris (dog) : COL5A1 (collagen type V alpha 1 chain)
Sus scrofa (pig) : COL5A1 (collagen type V alpha 1 chain)
Chlorocebus sabaeus (African green monkey) : COL5A1 (collagen type V alpha 1 chain)
Heterocephalus glaber (naked mole-rat) : Col5a1 (collagen type V alpha 1 chain)
more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
SpeTri2.0NW_0049366692,474,381 - 2,613,541 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene Ontology Annotations
Molecular Pathway Annotations


Comparative Map Data



Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
More on Col5a1
Ensembl Gene
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 12638037
Created: 2017-01-27
Species: Ictidomys tridecemlineatus
Last Modified: 2020-08-18
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.