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Gene: Col5a1 (collagen type V alpha 1 chain) Ictidomys tridecemlineatus
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Symbol: Col5a1
Name: collagen type V alpha 1 chain
CRRD ID: 12638037
Description: ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); heparin binding (ortholog); platelet-derived growth factor binding (ortholog); INVOLVED IN blood vessel development (ortholog); cell adhesion (ortholog); cell migration (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH alopecia (ortholog); Animal Mammary Neoplasms (ortholog); Ankyloblepharon Filiforme Adnatum (ortholog); FOUND IN basement membrane (ortholog); collagen trimer (ortholog); collagen type V trimer (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: collagen alpha-1(V) chain
Orthologs:
Homo sapiens (human) : COL5A1 (collagen type V alpha 1 chain)  HGNC  Alliance
Mus musculus (house mouse) : Col5a1 (collagen, type V, alpha 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Col5a1 (collagen type V alpha 1 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col5a1 (collagen type V alpha 1 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL5A1 (collagen type V alpha 1 chain)
Canis lupus familiaris (dog) : COL5A1 (collagen type V alpha 1 chain)
Sus scrofa (pig) : COL5A1 (collagen type V alpha 1 chain)
Chlorocebus sabaeus (African green monkey) : COL5A1 (collagen type V alpha 1 chain)
Heterocephalus glaber (naked mole-rat) : Col5a1 (collagen type V alpha 1 chain)
more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366692,474,381 - 2,613,541 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Expression


Sequence

Nucleotide Sequences
Protein Sequences

Additional Information

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More on Col5a1
NCBI Gene
Ensembl Gene
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 12638037
Created: 2017-01-27
Species: Ictidomys tridecemlineatus
Last Modified: 2020-08-18
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.