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Gene: Col3a1 (collagen type III alpha 1 chain) Ictidomys tridecemlineatus
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Symbol: Col3a1
Name: collagen type III alpha 1 chain
Description: ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); extracellular matrix structural constituent conferring tensile strength (ortholog); integrin binding (ortholog); INVOLVED IN aorta smooth muscle tissue morphogenesis (ortholog); cell-matrix adhesion (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN cell-extracellular matrix signaling pathway; endothelin signaling pathway; Entamoebiasis pathway; ASSOCIATED WITH Acute Otitis Media (ortholog); alcoholic liver cirrhosis (ortholog); Aneurysm (ortholog); FOUND IN collagen type III trimer (ortholog); collagen-containing extracellular matrix (ortholog); endoplasmic reticulum lumen (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: collagen alpha-1(III) chain
Orthologs:
Homo sapiens (human) : COL3A1 (collagen type III alpha 1 chain)  HGNC  Alliance
Mus musculus (house mouse) : Col3a1 (collagen, type III, alpha 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Col3a1 (collagen type III alpha 1 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col3a1 (collagen type III alpha 1 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL3A1 (collagen type III alpha 1 chain)
Canis lupus familiaris (dog) : COL3A1 (collagen type III alpha 1 chain)
Sus scrofa (pig) : COL3A1 (collagen type III alpha 1 chain)
Chlorocebus sabaeus (African green monkey) : COL3A1 (collagen type III alpha 1 chain)
Heterocephalus glaber (naked mole-rat) : Col3a1 (collagen type III alpha 1 chain)
more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365068,886,494 - 8,923,921 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Expression


Sequence

Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
 
More on Col3a1
NCBI Gene
Ensembl Gene
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 12678306
Created: 2017-01-27
Species: Ictidomys tridecemlineatus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.