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Gene: Col2a1 (collagen type II alpha 1 chain) Ictidomys tridecemlineatus
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Symbol: Col2a1
Name: collagen type II alpha 1 chain
Description: ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); extracellular matrix structural constituent conferring tensile strength (ortholog); identical protein binding (ortholog); INVOLVED IN anterior head development (ortholog); cartilage condensation (ortholog); cartilage development (ortholog); PARTICIPATES IN cell-extracellular matrix signaling pathway; Entamoebiasis pathway; syndecan signaling pathway; ASSOCIATED WITH achondrogenesis type II (ortholog); Animal Disease Models (ortholog); arthritis (ortholog); FOUND IN basement membrane (ortholog); collagen trimer (ortholog); collagen type II trimer (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: collagen alpha-1(II) chain
Orthologs:
Homo sapiens (human) : COL2A1 (collagen type II alpha 1 chain)  HGNC  Alliance
Mus musculus (house mouse) : Col2a1 (collagen, type II, alpha 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Col2a1 (collagen type II alpha 1 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col2a1 (collagen type II alpha 1 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL2A1 (collagen type II alpha 1 chain)
Canis lupus familiaris (dog) : COL2A1 (collagen type II alpha 1 chain)
Sus scrofa (pig) : COL2A1 (collagen type II alpha 1 chain)
Chlorocebus sabaeus (African green monkey) : COL2A1 (collagen type II alpha 1 chain)
Heterocephalus glaber (naked mole-rat) : Col2a1 (collagen type II alpha 1 chain)
more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365125,861,933 - 5,894,898 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene Ontology Annotations
Molecular Pathway Annotations

Genomics

Comparative Map Data

Expression


Sequence

Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
 
More on Col2a1
NCBI Gene
Ensembl Gene
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 12684077
Created: 2017-01-27
Species: Ictidomys tridecemlineatus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.