Dkk4 (dickkopf WNT signaling pathway inhibitor 4) - Chinchilla Research Resource Database
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Gene: Dkk4 (dickkopf WNT signaling pathway inhibitor 4) Ictidomys tridecemlineatus
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Symbol: Dkk4
Name: dickkopf WNT signaling pathway inhibitor 4
CRRD ID: 12720294
Description: INVOLVED IN negative regulation of hair follicle placode formation (ortholog); Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH IMMUNODEFICIENCY 15 (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: dickkopf-related protein 4
Orthologs:
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936785319,494 - 323,226 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
Dkk4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936785319,494 - 323,226 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DKK4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl842,374,063 - 42,377,229 (-)EnsemblGRCh38hg38GRCh38
GRCh38842,373,194 - 42,391,322 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37842,231,586 - 42,234,674 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36842,350,743 - 42,353,831 (-)NCBINCBI36hg18NCBI36
Build 34842,350,743 - 42,353,830NCBI
Celera841,176,301 - 41,179,389 (-)NCBI
Cytogenetic Map8p11.21NCBI
HuRef840,754,805 - 40,757,893 (-)NCBIHuRef
CHM1_1842,278,494 - 42,281,582 (-)NCBICHM1_1
Dkk4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39823,113,701 - 23,117,563 (+)NCBI
GRCm38822,623,685 - 22,628,018 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl822,624,043 - 22,627,547 (+)EnsemblGRCm38mm10GRCm38
MGSCv37823,734,515 - 23,738,019 (+)NCBIGRCm37mm9NCBIm37
MGSCv36824,089,588 - 24,093,092 (+)NCBImm8
Celera824,114,227 - 24,117,730 (+)NCBICelera
Cytogenetic Map8A2NCBI
Dkk4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01674,260,551 - 74,264,142 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1674,260,551 - 74,264,142 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01673,893,385 - 73,896,976 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41673,888,290 - 73,891,881 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1667,295,927 - 67,299,518 (-)NCBICelera
Cytogenetic Map16q12.5NCBI
DKK4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1839,062,711 - 39,082,575 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl839,062,711 - 39,082,575 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0841,618,173 - 41,638,550 (-)NCBIMhudiblu_PPA_v0panPan3
DKK4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1623,302,320 - 23,304,834 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11623,302,124 - 23,304,824 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
DKK4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1711,390,206 - 11,394,268 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11711,389,551 - 11,394,754 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21712,989,140 - 12,992,439 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DKK4
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl840,370,336 - 40,373,264 (-)Ensembl
ChlSab1.1840,370,299 - 40,386,835 (-)NCBI
Dkk4
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624780873,669 - 884,091 (+)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005340306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AGTP01107041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_005340306   ⟹   XP_005340363
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_004936785319,494 - 323,226 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005340363 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005340363   ⟸   XM_005340306
- UniProtKB: I3M6U2 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
Dickkopf_N   Prokineticin


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000005875 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSTOP00000005249 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000005869 ENTREZGENE, UniProtKB/TrEMBL
InterPro Dickkopf_N UniProtKB/TrEMBL
  DKK-like UniProtKB/TrEMBL
  Prokineticin_domain UniProtKB/TrEMBL
NCBI Gene Dkk4 ENTREZGENE
PANTHER PTHR12113 UniProtKB/TrEMBL
Pfam Dickkopf_N UniProtKB/TrEMBL
  Prokineticin UniProtKB/TrEMBL
UniProt I3M6U2 ENTREZGENE, UniProtKB/TrEMBL