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Gene: Dhx16 (DEAH-box helicase 16) Rattus norvegicus
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Symbol: Dhx16
Name: DEAH-box helicase 16
Description: Predicted to have 3'-5' RNA helicase activity and RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to localize to the nucleoplasm and spliceosomal complex. Orthologous to human DHX16 (DEAH-box helicase 16); PARTICIPATES IN spliceosome pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Dbp2; Ddx16; DEAH (Asp-Glu-Ala-His) box polypeptide 16; putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
Orthologs:
Homo sapiens (human) : DHX16 (DEAH-box helicase 16)  HGNC  Alliance
Mus musculus (house mouse) : Dhx16 (DEAH (Asp-Glu-Ala-His) box polypeptide 16)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Dhx16 (DEAH-box helicase 16)
Pan paniscus (bonobo/pygmy chimpanzee) : DHX16 (DEAH-box helicase 16)
Canis lupus familiaris (dog) : DHX16 (DEAH-box helicase 16)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Dhx16 (DEAH-box helicase 16)
Sus scrofa (pig) : DHX16 (DEAH-box helicase 16)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0203,368,971 - 3,386,087 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0205,466,494 - 5,483,222 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4203,009,770 - 3,022,969 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1203,009,977 - 3,023,169 (-)NCBI
Celera20288,017 - 301,014 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Dhx16
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1302963
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.