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Gene: Xirp2 (xin actin-binding repeat containing 2) Rattus norvegicus
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Symbol: Xirp2
Name: xin actin-binding repeat containing 2
Description: Predicted to have actin filament binding activity and alpha-actinin binding activity. Predicted to be involved in cardiac muscle tissue morphogenesis; cell-cell junction organization; and ventricular septum development. Predicted to colocalize with the focal adhesion and stress fiber. Orthologous to human XIRP2 (xin actin binding repeat containing 2); INTERACTS WITH acrylamide; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: beta-xin; cardiomyopathy associated 3; cardiomyopathy-associated protein 3; Cmya3; L-NAME induced actin cytoskeletal protein; L-NAME-induced actin cytoskeletal protein; LACS; xin actin-binding repeat-containing protein 2
Orthologs:
Homo sapiens (human) : XIRP2 (xin actin binding repeat containing 2)  HGNC  Alliance
Mus musculus (house mouse) : Xirp2 (xin actin-binding repeat containing 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Xirp2 (xin actin binding repeat containing 2)
Pan paniscus (bonobo/pygmy chimpanzee) : XIRP2 (xin actin binding repeat containing 2)
Canis lupus familiaris (dog) : XIRP2 (xin actin binding repeat containing 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Xirp2 (xin actin binding repeat containing 2)
Sus scrofa (pig) : XIRP2 (xin actin binding repeat containing 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0353,563,207 - 53,658,113 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0360,181,174 - 60,274,635 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4349,414,869 - 49,502,136 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1349,311,240 - 49,398,505 (+)NCBI
Celera351,697,264 - 51,784,744 (+)NCBICelera
Cytogenetic Map3q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Xirp2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1302980
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.