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Gene: Cchcr1 (coiled-coil alpha-helical rod protein 1) Rattus norvegicus
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Symbol: Cchcr1
Name: coiled-coil alpha-helical rod protein 1
Description: Predicted to have identical protein binding activity. Predicted to be involved in protein export from nucleus. Predicted to localize to the centriole and cytosol. Orthologous to human CCHCR1 (coiled-coil alpha-helical rod protein 1); INTERACTS WITH 2,4-dinitrotoluene; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: C6orf18; Hcr; HCR (a-helix coiled-coil rod homolog)
Orthologs:
Homo sapiens (human) : CCHCR1 (coiled-coil alpha-helical rod protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Cchcr1 (coiled-coil alpha-helical rod protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cchcr1 (coiled-coil alpha-helical rod protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CCHCR1 (coiled-coil alpha-helical rod protein 1)
Canis lupus familiaris (dog) : CCHCR1 (coiled-coil alpha-helical rod protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cchcr1 (coiled-coil alpha-helical rod protein 1)
Sus scrofa (pig) : CCHCR1 (coiled-coil alpha-helical rod protein 1)
Chlorocebus sabaeus (green monkey) : CCHCR1 (coiled-coil alpha-helical rod protein 1)
Heterocephalus glaber (naked mole-rat) : Cchcr1 (coiled-coil alpha-helical rod protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0203,730,968 - 3,745,721 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl203,730,955 - 3,740,009 (-)Ensembl
Rnor_5.0205,817,710 - 5,832,463 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera20632,753 - 645,257 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cchcr1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1302992
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.