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Gene: Ly96 (lymphocyte antigen 96) Rattus norvegicus
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Symbol: Ly96
Name: lymphocyte antigen 96
Description: Predicted to have lipopolysaccharide receptor activity. Predicted to be involved in several processes, including positive regulation of lipopolysaccharide-mediated signaling pathway; response to lipopolysaccharide; and toll-like receptor 4 signaling pathway. Predicted to localize to the intrinsic component of plasma membrane and lipopolysaccharide receptor complex. Orthologous to human LY96 (lymphocyte antigen 96); PARTICIPATES IN Toll-like receptor signaling pathway; toxoplasmosis pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 4,4'-diaminodiphenylmethane; amphetamine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LPS co-receptor MD-2; MD-2; MD2
Orthologs:
Homo sapiens (human) : LY96 (lymphocyte antigen 96)  HGNC  Alliance
Mus musculus (house mouse) : Ly96 (lymphocyte antigen 96)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ly96 (lymphocyte antigen 96)
Pan paniscus (bonobo/pygmy chimpanzee) : LY96 (lymphocyte antigen 96)
Canis lupus familiaris (dog) : LY96 (lymphocyte antigen 96)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ly96 (lymphocyte antigen 96)
Sus scrofa (pig) : LY96 (lymphocyte antigen 96)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.051,972,212 - 1,989,448 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.051,967,544 - 1,984,775 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.451,701,969 - 1,705,247 (-)NCBIRGSC3.4rn4RGSC3.4
Celera52,204,184 - 2,228,082 (-)NCBICelera
Cytogenetic Map5q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ly96
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1302993
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.