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Gene: Ly6g6c (lymphocyte antigen 6 family member G6C) Rattus norvegicus
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Symbol: Ly6g6c
Name: lymphocyte antigen 6 family member G6C
Description: Predicted to have identical protein binding activity. Predicted to be involved in protein homooligomerization and response to bacterium. Predicted to colocalize with the external side of plasma membrane. Orthologous to human LY6G6C (lymphocyte antigen 6 family member G6C); INTERACTS WITH (RS)-amphetamine; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1-naphthyl isothiocyanate.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: lymphocyte antigen 6 complex G6C; lymphocyte antigen 6 complex locus protein G6c; lymphocyte antigen 6 complex, locus G6C
Orthologs:
Homo sapiens (human) : LY6G6C (lymphocyte antigen 6 family member G6C)  HGNC  Alliance
Mus musculus (house mouse) : Ly6g6c (lymphocyte antigen 6 complex, locus G6C)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ly6g6c (lymphocyte antigen 6 family member G6C)
Pan paniscus (bonobo/pygmy chimpanzee) : LY6G6C (lymphocyte antigen 6 family member G6C)
Canis lupus familiaris (dog) : LY6G6C (lymphocyte antigen 6 family member G6C)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ly6g6c (lymphocyte antigen 6 family member G6C)
Sus scrofa (pig) : LY6G6C (lymphocyte antigen 6 family member G6C)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0205,056,851 - 5,060,398 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0207,130,631 - 7,133,328 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4203,817,976 - 3,820,673 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1203,818,202 - 3,820,900 (-)NCBI
Celera204,269,727 - 4,272,424 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ly6g6c
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1302999
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.