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Gene: Msh5 (mutS homolog 5) Rattus norvegicus
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Symbol: Msh5
Name: mutS homolog 5
Description: Predicted to contribute to mismatched DNA binding activity. Predicted to be involved in DNA metabolic process; female gamete generation; and synapsis. Predicted to localize to the mismatch repair complex and synaptonemal complex. Human ortholog(s) of this gene implicated in premature ovarian failure. Orthologous to human MSH5 (mutS homolog 5); INTERACTS WITH (RS)-amphetamine; 2,2',4,4'-Tetrabromodiphenyl ether; 4-amino-2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: mutS homolog 5 (E. coli); mutS protein homolog 5
Orthologs:
Homo sapiens (human) : MSH5 (mutS homolog 5)  HGNC  Alliance
Mus musculus (house mouse) : Msh5 (mutS homolog 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Msh5 (mutS homolog 5)
Pan paniscus (bonobo/pygmy chimpanzee) : MSH5 (mutS homolog 5)
Canis lupus familiaris (dog) : MSH5 (mutS homolog 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Msh5 (mutS homolog 5)
Sus scrofa (pig) : MSH5 (mutS homolog 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0205,020,690 - 5,037,125 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0207,093,706 - 7,110,044 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4203,845,731 - 3,862,011 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1203,846,041 - 3,862,242 (+)NCBI
Celera204,233,160 - 4,249,400 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Msh5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303008
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.