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Gene: Crat (carnitine O-acetyltransferase) Rattus norvegicus
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Symbol: Crat
Name: carnitine O-acetyltransferase
Description: Exhibits carnitine O-acetyltransferase activity. Involved in fatty acid metabolic process. Predicted to localize to the mitochondrion and peroxisome. Human ortholog(s) of this gene implicated in neurodegeneration with brain iron accumulation. Orthologous to human CRAT (carnitine O-acetyltransferase); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: carnitine acetylase; carnitine acetyltransferase; CAT; MGC94385
Orthologs:
Homo sapiens (human) : CRAT (carnitine O-acetyltransferase)  HGNC  Alliance
Mus musculus (house mouse) : Crat (carnitine acetyltransferase)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Crat (carnitine O-acetyltransferase)
Pan paniscus (bonobo/pygmy chimpanzee) : CRAT (carnitine O-acetyltransferase)
Canis lupus familiaris (dog) : CRAT (carnitine O-acetyltransferase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Crat (carnitine O-acetyltransferase)
Sus scrofa (pig) : CRAT (carnitine O-acetyltransferase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.038,967,984 - 8,981,959 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl38,968,417 - 8,981,362 (-)Ensembl
Rnor_5.0314,320,758 - 14,334,741 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.439,447,585 - 9,461,180 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.139,447,886 - 9,461,480 (-)NCBI
Celera38,442,229 - 8,455,824 (-)NCBICelera
Cytogenetic Map3p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Crat
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303031
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.