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Gene: Clic1 (chloride intracellular channel 1) Rattus norvegicus
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Symbol: Clic1
Name: chloride intracellular channel 1
Description: Predicted to have chloride channel activity. Predicted to be involved in chloride transport; positive regulation of osteoblast differentiation; and regulation of mitochondrial membrane potential. Predicted to localize to the cytoplasm; extracellular exosome; and nuclear envelope. Orthologous to human CLIC1 (chloride intracellular channel 1); INTERACTS WITH (RS)-amphetamine; 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: chloride intracellular channel protein 1
Orthologs:
Homo sapiens (human) : CLIC1 (chloride intracellular channel 1)  HGNC  Alliance
Mus musculus (house mouse) : Clic1 (chloride intracellular channel 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clic1 (chloride intracellular channel 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CLIC1 (chloride intracellular channel 1)
Canis lupus familiaris (dog) : CLIC1 (chloride intracellular channel 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clic1 (chloride intracellular channel 1)
Sus scrofa (pig) : CLIC1 (chloride intracellular channel 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0205,040,314 - 5,049,166 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0207,113,249 - 7,122,096 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4203,498,935 - 3,842,500 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1203,499,166 - 3,842,700 (-)NCBI
Celera204,252,631 - 4,261,199 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Clic1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303043
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.