Gene: Katna1 (katanin catalytic subunit A1) Rattus norvegicus
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Symbol: Katna1
Name: katanin catalytic subunit A1
Description: Predicted to have several functions, including dynein complex binding activity, microtubule binding activity, and microtubule-severing ATPase activity; involved in microtubule severing and negative regulation of neuron projection development; localizes to the growth cone and neuronal cell body; orthologous to human KATNA1 (katanin catalytic subunit A1); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: katanin; katanin p60 (ATPase-containing) subunit A1; katanin p60 ATPase-containing subunit A1; katanin p60 subunit A 1; katanin p60 subunit A1; microtubule severing protein; p60 katanin
Orthologs:
Homo sapiens (human) : KATNA1 (katanin catalytic subunit A1)  HGNC  Alliance
Mus musculus (house mouse) : Katna1 (katanin p60 (ATPase-containing) subunit A1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Katna1 (katanin catalytic subunit A1)
Pan paniscus (bonobo/pygmy chimpanzee) : KATNA1 (katanin catalytic subunit A1)
Canis lupus familiaris (dog) : KATNA1 (katanin catalytic subunit A1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Katna1 (katanin catalytic subunit A1)
Sus scrofa (pig) : KATNA1 (katanin catalytic subunit A1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.011,826,170 - 1,867,786 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.013,522,927 - 3,564,344 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.412,394,947 - 2,436,574 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.112,394,946 - 2,436,572 (+)NCBI
Celera1751,300 - 792,888 (+)NCBICelera
Cytogenetic Map1p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Katna1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303062
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.