Gene: Xbp1 (X-box binding protein 1) Rattus norvegicus
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Symbol: Xbp1
Name: X-box binding protein 1
Description: Exhibits DNA-binding transcription factor activity and sequence-specific DNA binding activity; involved in several processes, including cellular response to antibiotic, endoplasmic reticulum unfolded protein response, and negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway; localizes to the nucleus; orthologous to human XBP1 (X-box binding protein 1); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; forkhead class A signaling pathway; Endoplasmic Reticulum-associated degradation pathway; INTERACTS WITH (R)-noradrenaline; (S)-nicotine; 2-amino-2-deoxy-D-glucopyranose.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: hepatocarcinogenesis-related transcription factor; HTF; X-box-binding protein 1
Orthologs:
Homo sapiens (human) : XBP1 (X-box binding protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Xbp1 (X-box binding protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Xbp1 (X-box binding protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : XBP1 (X-box binding protein 1)
Canis lupus familiaris (dog) : XBP1 (X-box binding protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Xbp1 (X-box binding protein 1)
Sus scrofa (pig) : XBP1 (X-box binding protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01485,753,736 - 85,758,820 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01486,423,839 - 86,428,923 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41486,151,910 - 86,156,975 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11486,171,054 - 86,176,119 (+)NCBI
Celera1479,276,264 - 79,281,348 (+)NCBICelera
Cytogenetic Map14q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Xbp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303073
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.