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Gene: Pbx2 (PBX homeobox 2) Rattus norvegicus
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Symbol: Pbx2
Name: PBX homeobox 2
Description: Predicted to have several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and chromatin binding activity. Predicted to be involved in several processes, including animal organ development; embryonic limb morphogenesis; and positive regulation of transcription by RNA polymerase II. Predicted to localize to nucleus and transcription regulator complex. Orthologous to human PBX2 (PBX homeobox 2); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,4,6-trinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: pre-B-cell leukemia homeobox 2; pre-B-cell leukemia transcription factor 2
Orthologs:
Homo sapiens (human) : PBX2 (PBX homeobox 2)  HGNC  Alliance
Mus musculus (house mouse) : Pbx2 (pre B cell leukemia homeobox 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pbx2 (PBX homeobox 2)
Pan paniscus (bonobo/pygmy chimpanzee) : PBX2 (PBX homeobox 2)
Canis lupus familiaris (dog) : PBX2 (PBX homeobox 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pbx2 (PBX homeobox 2)
Sus scrofa (pig) : PBX2 (PBX homeobox 2)
Chlorocebus sabaeus (African green monkey) : PBX2 (PBX homeobox 2)
Heterocephalus glaber (naked mole-rat) : Pbx2 (PBX homeobox 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0204,357,805 - 4,362,730 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl204,357,733 - 4,362,682 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0206,437,161 - 6,442,086 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4204,253,962 - 4,259,185 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1204,254,236 - 4,259,412 (-)NCBI
Celera203,873,856 - 3,878,704 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pbx2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303084
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.