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Gene: Itgb6 (integrin subunit beta 6) Rattus norvegicus
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Symbol: Itgb6
Name: integrin subunit beta 6
Description: Predicted to have integrin binding activity. Predicted to be involved in several processes, including cell adhesion mediated by integrin; integrin-mediated signaling pathway; and transforming growth factor-beta secretion. Predicted to localize to several cellular components, including the focal adhesion; integrin alphav-beta6 complex; and nucleoplasm. Human ortholog(s) of this gene implicated in amelogenesis imperfecta type 1H. Orthologous to human ITGB6 (integrin subunit beta 6); PARTICIPATES IN integrin mediated signaling pathway; arrhythmogenic right ventricular cardiomyopathy pathway; cell-extracellular matrix signaling pathway; INTERACTS WITH 17alpha-ethynylestradiol; 6-propyl-2-thiouracil; 7,12-dimethyltetraphene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: integrin beta 6; integrin beta-6; integrin, beta 6; MGC94023
Orthologs:
Homo sapiens (human) : ITGB6 (integrin subunit beta 6)  HGNC  Alliance
Mus musculus (house mouse) : Itgb6 (integrin beta 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Itgb6 (integrin subunit beta 6)
Pan paniscus (bonobo/pygmy chimpanzee) : ITGB6 (integrin subunit beta 6)
Canis lupus familiaris (dog) : ITGB6 (integrin subunit beta 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Itgb6 (integrin subunit beta 6)
Sus scrofa (pig) : ITGB6 (integrin subunit beta 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0346,652,624 - 46,775,362 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0351,760,871 - 51,883,770 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4342,286,140 - 42,360,793 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1342,182,533 - 42,257,165 (-)NCBI
Celera344,745,206 - 44,817,710 (-)NCBICelera
Cytogenetic Map3q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Itgb6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303119
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.