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Gene: Slc44a4 (solute carrier family 44, member 4) Rattus norvegicus
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Symbol: Slc44a4
Name: solute carrier family 44, member 4
CRRD ID: 1303167
Description: Predicted to have choline transmembrane transporter activity and thiamine pyrophosphate transmembrane transporter activity. Predicted to be involved in several processes, including acetylcholine biosynthetic process; organic cation transport; and sensory organ development. Predicted to localize to apical plasma membrane. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 72. Orthologous to human SLC44A4 (solute carrier family 44 member 4); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: choline transporter-like protein 4; Ng22; solute carrier family 44 member 4; thiamine pyrophosphate transporter 1
Orthologs:
Homo sapiens (human) : SLC44A4 (solute carrier family 44 member 4)  HGNC  Alliance
Mus musculus (house mouse) : Slc44a4 (solute carrier family 44, member 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc44a4 (solute carrier family 44 member 4)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC44A4 (solute carrier family 44 member 4)
Canis lupus familiaris (dog) : SLC44A4 (solute carrier family 44 member 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc44a4 (solute carrier family 44 member 4)
Sus scrofa (pig) : SLC44A4 (solute carrier family 44 member 4)
Chlorocebus sabaeus (African green monkey) : SLC44A4 (solute carrier family 44 member 4)
Heterocephalus glaber (naked mole-rat) : Slc44a4 (solute carrier family 44 member 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0204,593,389 - 4,609,641 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl204,593,389 - 4,609,631 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0206,673,376 - 6,689,628 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4204,005,154 - 4,021,270 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1204,005,380 - 4,021,497 (-)NCBI
Celera204,110,301 - 4,126,373 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Slc44a4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303167
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.