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Gene: Phactr1 (phosphatase and actin regulator 1) Rattus norvegicus
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Symbol: Phactr1
Name: phosphatase and actin regulator 1
Description: Exhibits protein phosphatase 1 binding activity. Involved in regulation of phosphorylation. Localizes to the synapse. Human ortholog(s) of this gene implicated in early infantile epileptic encephalopathy. Orthologous to human PHACTR1 (phosphatase and actin regulator 1); INTERACTS WITH 17beta-estradiol 3-benzoate; 2,4-dinitrotoluene; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC112561
Orthologs:
Homo sapiens (human) : PHACTR1 (phosphatase and actin regulator 1)  HGNC  Alliance
Mus musculus (house mouse) : Phactr1 (phosphatase and actin regulator 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Phactr1 (phosphatase and actin regulator 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PHACTR1 (phosphatase and actin regulator 1)
Canis lupus familiaris (dog) : PHACTR1 (phosphatase and actin regulator 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Phactr1 (phosphatase and actin regulator 1)
Sus scrofa (pig) : PHACTR1 (phosphatase and actin regulator 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01723,245,423 - 23,761,207 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01725,209,368 - 25,713,282 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41727,393,237 - 27,884,127 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11727,395,233 - 27,885,918 (-)NCBI
Celera1721,259,994 - 21,732,655 (-)NCBICelera
Cytogenetic Map17p13-p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Phactr1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303187
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.