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Gene: Phf1 (PHD finger protein 1) Rattus norvegicus
Symbol: Phf1
Name: PHD finger protein 1
Description: Exhibits chromatin binding activity. Predicted to be involved in several processes, including cellular response to DNA damage stimulus; regulation of histone H3-K27 methylation; and regulation of transcription, DNA-templated. Localizes to nucleus. Predicted to colocalize with ESC/E(Z) complex and centrosome. Orthologous to human PHF1 (PHD finger protein 1); PARTICIPATES IN histone modification pathway; INTERACTS WITH 3,3',4,4',5-pentachlorobiphenyl; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: MGC94975; polycomb-like 1; T-complex testis-expressed 3; Tctex3
Homo sapiens (human) : PHF1 (PHD finger protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Phf1 (PHD finger protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Phf1 (PHD finger protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PHF1 (PHD finger protein 1)
Canis lupus familiaris (dog) : PHF1 (PHD finger protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Phf1 (PHD finger protein 1)
Sus scrofa (pig) : PHF1 (PHD finger protein 1)
Chlorocebus sabaeus (African green monkey) : PHF1 (PHD finger protein 1)
Heterocephalus glaber (naked mole-rat) : Phf1 (PHD finger protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0205,526,926 - 5,531,940 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl205,526,961 - 5,531,941 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0207,585,909 - 7,590,953 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4205,170,270 - 5,175,027 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1205,170,496 - 5,175,254 (+)NCBI
Celera206,600,534 - 6,605,292 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Phf1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303205
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.