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Gene: Sptb (spectrin, beta, erythrocytic) Rattus norvegicus
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Symbol: Sptb
Name: spectrin, beta, erythrocytic
Description: Predicted to have actin filament binding activity; ankyrin binding activity; and protein heterodimerization activity. Predicted to be involved in hemopoiesis; plasma membrane organization; and porphyrin-containing compound biosynthetic process. Predicted to localize to several cellular components, including the cell surface; cytoskeleton; and cytosol. Human ortholog(s) of this gene implicated in hereditary spherocytosis and hereditary spherocytosis type 2. Orthologous to human SPTB (spectrin beta, erythrocytic); INTERACTS WITH 17beta-estradiol; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: erythroid spectrin beta; hypothetical protein LOC679700; LOC314251; LOC679700; spectrin beta 1; spectrin beta chain, erythrocyte; spectrin beta chain, erythrocytic; Spnb1
Orthologs:
Homo sapiens (human) : SPTB (spectrin beta, erythrocytic)  HGNC  Alliance
Mus musculus (house mouse) : Sptb (spectrin beta, erythrocytic)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sptb (spectrin beta, erythrocytic)
Pan paniscus (bonobo/pygmy chimpanzee) : SPTB (spectrin beta, erythrocytic)
Canis lupus familiaris (dog) : SPTB (spectrin beta, erythrocytic)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sptb (spectrin beta, erythrocytic)
Sus scrofa (pig) : SPTB (spectrin beta, erythrocytic)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0699,657,144 - 99,783,189 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl699,659,651 - 99,783,047 (-)Ensembl
Rnor_5.06109,055,163 - 109,181,316 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4699,194,202 - 99,315,691 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1699,197,658 - 99,319,147 (-)NCBI
Celera693,748,706 - 93,857,362 (-)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Sptb
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303243
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.