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Gene: Mkrn1 (makorin ring finger protein 1) Rattus norvegicus
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Symbol: Mkrn1
Name: makorin ring finger protein 1
Description: Predicted to have chromatin binding activity and ubiquitin-protein transferase activity. Predicted to be involved in cellular response to leukemia inhibitory factor and protein polyubiquitination. Orthologous to human MKRN1 (makorin ring finger protein 1); INTERACTS WITH tolcapone; valdecoxib; (-)-epigallocatechin 3-gallate (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E3 ubiquitin-protein ligase makorin-1; MGC94941; similar to Mkrn1 protein
Orthologs:
Homo sapiens (human) : MKRN1 (makorin ring finger protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Mkrn1 (makorin, ring finger protein, 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Mkrn1 (makorin ring finger protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : MKRN1 (makorin ring finger protein 1)
Canis lupus familiaris (dog) : MKRN1 (makorin ring finger protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Mkrn1 (makorin ring finger protein 1)
Sus scrofa (pig) : MKRN1 (makorin ring finger protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0467,185,167 - 67,206,478 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0466,991,930 - 67,013,553 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4466,911,794 - 66,929,911 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1467,187,926 - 67,206,041 (-)NCBI
Celera463,184,121 - 63,202,238 (-)NCBICelera
Cytogenetic Map4q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Mkrn1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303251
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.