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Gene: Tbc1d20 (TBC1 domain family, member 20) Rattus norvegicus
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Symbol: Tbc1d20
Name: TBC1 domain family, member 20
Description: Predicted to have GTPase activator activity and Rab GTPase binding activity. Predicted to be involved in several processes, including COPII-coated vesicle cargo loading; lens fiber cell morphogenesis; and positive regulation of viral process. Predicted to localize to the endoplasmic reticulum membrane; integral component of Golgi membrane; and nuclear membrane. Human ortholog(s) of this gene implicated in Warburg micro syndrome 4. Orthologous to human TBC1D20 (TBC1 domain family member 20); INTERACTS WITH (+)-schisandrin B; 2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC94895; similar to chromosome 20 open reading frame 140; TBC1 domain family member 20
Orthologs:
Homo sapiens (human) : TBC1D20 (TBC1 domain family member 20)  HGNC  Alliance
Mus musculus (house mouse) : Tbc1d20 (TBC1 domain family, member 20)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tbc1d20 (TBC1 domain family member 20)
Pan paniscus (bonobo/pygmy chimpanzee) : TBC1D20 (TBC1 domain family member 20)
Canis lupus familiaris (dog) : TBC1D20 (TBC1 domain family member 20)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tbc1d20 (TBC1 domain family member 20)
Sus scrofa (pig) : TBC1D20 (TBC1 domain family member 20)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03147,772,006 - 147,790,946 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03154,120,296 - 154,137,199 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43142,623,713 - 142,640,197 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13142,529,285 - 142,545,770 (+)NCBI
Celera3139,520,860 - 139,537,468 (+)NCBICelera
Cytogenetic Map3q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tbc1d20
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303293
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.