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Gene: Gpank1 (G patch domain and ankyrin repeats 1) Rattus norvegicus
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Symbol: Gpank1
Name: G patch domain and ankyrin repeats 1
Description: Predicted to have nucleic acid binding activity. Orthologous to human GPANK1 (G-patch domain and ankyrin repeats 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Bat4; Bat4 gene; G patch domain and ankyrin repeat-containing protein 1; HLA-B associated transcript 4
Orthologs:
Homo sapiens (human) : GPANK1 (G-patch domain and ankyrin repeats 1)  HGNC  Alliance
Mus musculus (house mouse) : Gpank1 (G patch domain and ankyrin repeats 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gpank1 (G-patch domain and ankyrin repeats 1)
Pan paniscus (bonobo/pygmy chimpanzee) : GPANK1 (G-patch domain and ankyrin repeats 1)
Canis lupus familiaris (dog) : GPANK1 (G-patch domain and ankyrin repeats 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gpank1 (G-patch domain and ankyrin repeats 1)
Sus scrofa (pig) : GPANK1 (G-patch domain and ankyrin repeats 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0205,113,232 - 5,116,382 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0207,186,483 - 7,189,641 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4203,761,295 - 3,764,338 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1203,763,020 - 3,763,294 (-)NCBI
Celera204,324,958 - 4,328,001 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Gpank1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303304
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.