Gene: Tspan1 (tetraspanin 1) Rattus norvegicus
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Symbol: Tspan1
Name: tetraspanin 1
Description: Predicted to be involved in several processes, including cell migration, cell population proliferation, and cell surface receptor signaling pathway; predicted to localize to several cellular components, including the cell junction, integral component of plasma membrane, and nucleoplasm; orthologous to human TSPAN1 (tetraspanin 1); INTERACTS WITH 17alpha-ethynylestradiol; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC93753; tetraspan 1; tetraspanin-1; tspan-1
Orthologs:
Homo sapiens (human) : TSPAN1 (tetraspanin 1)  HGNC  Alliance
Mus musculus (house mouse) : Tspan1 (tetraspanin 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tspan1 (tetraspanin 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TSPAN1 (tetraspanin 1)
Canis lupus familiaris (dog) : TSPAN1 (tetraspanin 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tspan1 (tetraspanin 1)
Sus scrofa (pig) : TSPAN1 (tetraspanin 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05135,019,206 - 135,032,412 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05138,803,950 - 138,816,295 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45136,442,094 - 136,447,120 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15136,447,320 - 136,452,346 (-)NCBI
Celera5128,175,301 - 128,180,327 (-)NCBICelera
Cytogenetic Map5q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tspan1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303308
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.