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Gene: Atf6b (activating transcription factor 6 beta) Rattus norvegicus
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Symbol: Atf6b
Name: activating transcription factor 6 beta
Description: Predicted to contribute to RNA polymerase II distal enhancer sequence-specific DNA binding activity. Predicted to be involved in negative regulation of ATF6-mediated unfolded protein response and positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress. Predicted to localize to the endoplasmic reticulum membrane; nucleus; and protein-DNA complex. Orthologous to human ATF6B (activating transcription factor 6 beta); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; INTERACTS WITH cadmium dichloride; endosulfan; trichloroethene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: cAMP responsive element binding protein-like 1; Crebl1; cyclic AMP-dependent transcription factor ATF-6 beta; MGC112556
Orthologs:
Homo sapiens (human) : ATF6B (activating transcription factor 6 beta)  HGNC  Alliance
Mus musculus (house mouse) : Atf6b (activating transcription factor 6 beta)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atf6b (activating transcription factor 6 beta)
Pan paniscus (bonobo/pygmy chimpanzee) : ATF6B (activating transcription factor 6 beta)
Canis lupus familiaris (dog) : ATF6B (activating transcription factor 6 beta)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atf6b (activating transcription factor 6 beta)
Sus scrofa (pig) : ATF6B (activating transcription factor 6 beta)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0204,414,283 - 4,422,283 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0206,493,639 - 6,501,639 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4204,192,185 - 4,200,036 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1204,192,411 - 4,200,335 (-)NCBI
Celera203,931,428 - 3,939,279 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Atf6b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303317
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.