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Gene: Ush1c (USH1 protein network component harmonin) Rattus norvegicus
Symbol: Ush1c
Name: USH1 protein network component harmonin
Description: Exhibits myosin tail binding activity. Predicted to be involved in several processes, including parallel actin filament bundle assembly; photoreceptor cell maintenance; and sensory organ development. Localizes to several cellular components, including photoreceptor inner segment; photoreceptor outer segment; and stereocilium. Predicted to colocalize with photoreceptor connecting cilium. Human ortholog(s) of this gene implicated in Usher syndrome; Usher syndrome type 1; Usher syndrome type 1C; and autosomal recessive nonsyndromic deafness 18A. Orthologous to human USH1C (USH1 protein network component harmonin); PARTICIPATES IN auditory mechanotransduction pathway; retinitis pigmentosa pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; furan.
Type: protein-coding
Also known as: harmonin; harmonin a1; MGC112571; Usher syndrome 1C; Usher syndrome 1C homolog; Usher syndrome 1C homolog (human)
Homo sapiens (human) : USH1C (USH1 protein network component harmonin)  HGNC  Alliance
Mus musculus (house mouse) : Ush1c (USH1 protein network component harmonin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ush1c (USH1 protein network component harmonin)
Pan paniscus (bonobo/pygmy chimpanzee) : USH1C (USH1 protein network component harmonin)
Canis lupus familiaris (dog) : USH1C (USH1 protein network component harmonin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ush1c (USH1 protein network component harmonin)
Sus scrofa (pig) : USH1C (USH1 protein network component harmonin)
Chlorocebus sabaeus (African green monkey) : USH1C (USH1 protein network component harmonin)
Heterocephalus glaber (naked mole-rat) : Ush1c (USH1 protein network component harmonin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01102,207,096 - 102,256,779 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1102,207,096 - 102,255,459 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01103,291,318 - 103,340,928 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4196,720,185 - 96,768,550 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1196,798,295 - 96,846,661 (-)NCBI
Celera190,943,948 - 90,992,307 (-)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
More on Ush1c
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303329
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.