Gene: Clec4d (C-type lectin domain family 4, member D) Rattus norvegicus
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Symbol: Clec4d
Name: C-type lectin domain family 4, member D
Description: Predicted to have immunoglobulin receptor binding activity; predicted to be involved in several processes, including Fc-gamma receptor signaling pathway, T cell differentiation involved in immune response, and defense response to other organism; predicted to localize to the plasma membrane; orthologous to human CLEC4D (C-type lectin domain family 4 member D); INTERACTS WITH (RS)-amphetamine; 3,7-dihydropurine-6-thione; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: C-type (calcium dependent, carbohydrate recognition domain) lectin, superfamily member 8; C-type lectin domain family 4 member D; C-type lectin superfamily member 8; Clecsf8; macrophage C-type lectin; Mcl
Orthologs:
Homo sapiens (human) : CLEC4D (C-type lectin domain family 4 member D)  HGNC  Alliance
Mus musculus (house mouse) : Clec4d (C-type lectin domain family 4, member d)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clec4d (C-type lectin domain family 4 member D)
Pan paniscus (bonobo/pygmy chimpanzee) : CLEC4D (C-type lectin domain family 4 member D)
Canis lupus familiaris (dog) : LOC611536 (C-type lectin domain family 4 member D)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clec4d (C-type lectin domain family 4 member D)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04156,253,084 - 156,264,766 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04223,269,999 - 223,281,665 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44159,883,556 - 159,892,609 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14160,128,491 - 160,137,545 (+)NCBI
Celera4145,381,212 - 145,388,954 (+)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Clec4d
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1303339
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.