Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Senp6 (SUMO specific peptidase 6) Rattus norvegicus
Analyze
Symbol: Senp6
Name: SUMO specific peptidase 6
Description: Predicted to have SUMO-specific endopeptidase activity. Predicted to be involved in protein desumoylation; regulation of kinetochore assembly; and regulation of spindle assembly. Predicted to localize to the cytosol and nucleoplasm. Orthologous to human SENP6 (SUMO specific peptidase 6); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC300860; sentrin-specific protease 6; SUMO/sentrin specific peptidase 6; SUMO/sentrin specific protease 6; SUMO1/sentrin specific peptidase 6; Sumo1/sentrin/SMT3 specific peptidase 6
Orthologs:
Homo sapiens (human) : SENP6 (SUMO specific peptidase 6)  HGNC  Alliance
Mus musculus (house mouse) : Senp6 (SUMO/sentrin specific peptidase 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Senp6 (SUMO specific peptidase 6)
Pan paniscus (bonobo/pygmy chimpanzee) : SENP6 (SUMO specific peptidase 6)
Canis lupus familiaris (dog) : SENP6 (SUMO specific peptidase 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Senp6 (SUMO specific peptidase 6)
Sus scrofa (pig) : SENP6 (SUMO specific peptidase 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0887,486,050 - 87,568,088 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl887,486,427 - 87,563,652 (+)Ensembl
Rnor_5.0887,024,942 - 87,106,345 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4885,123,804 - 85,183,953 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1885,143,062 - 85,203,408 (+)NCBI
Celera880,712,750 - 80,790,749 (+)NCBICelera
Cytogenetic Map8q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Senp6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1304565
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.