Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Igsf9 (immunoglobulin superfamily, member 9) Rattus norvegicus
Analyze
Symbol: Igsf9
Name: immunoglobulin superfamily, member 9
Description: Predicted to have cell-cell adhesion mediator activity. Predicted to be involved in dendrite development; homophilic cell adhesion via plasma membrane adhesion molecules; and regulation of synapse organization. Predicted to localize to the axon; dendrite; and inhibitory synapse. Orthologous to human IGSF9 (immunoglobulin superfamily member 9); INTERACTS WITH 17beta-estradiol 3-benzoate; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: dendrite arborization and synapse maturation protein 1; igSF9A; immunoglobulin superfamily member 9A; LOC304982; protein turtle homolog A
Orthologs:
Homo sapiens (human) : IGSF9 (immunoglobulin superfamily member 9)  HGNC  Alliance
Mus musculus (house mouse) : Igsf9 (immunoglobulin superfamily, member 9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Igsf9 (immunoglobulin superfamily member 9)
Pan paniscus (bonobo/pygmy chimpanzee) : IGSF9 (immunoglobulin superfamily member 9)
Canis lupus familiaris (dog) : IGSF9 (immunoglobulin superfamily member 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Igsf9 (immunoglobulin superfamily member 9)
Sus scrofa (pig) : IGSF9 (immunoglobulin superfamily member 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01390,809,459 - 90,832,300 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01395,388,686 - 95,405,645 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41388,487,239 - 88,503,824 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11388,678,088 - 88,692,606 (+)NCBI
Celera1384,558,646 - 84,575,230 (+)NCBICelera
Cytogenetic Map13q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Igsf9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1304566
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.