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Gene: Abca12 (ATP binding cassette subfamily A member 12) Rattus norvegicus
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Symbol: Abca12
Name: ATP binding cassette subfamily A member 12
Description: Predicted to have ATPase-coupled transmembrane transporter activity; apolipoprotein A-I receptor binding activity; and lipid transporter activity. Predicted to be involved in several processes, including lipid transport; positive regulation of cholesterol efflux; and skin development. Predicted to localize to the cytoplasm; intracellular membrane-bounded organelle; and plasma membrane. Human ortholog(s) of this gene implicated in autosomal recessive congenital ichthyosis 1; autosomal recessive congenital ichthyosis 4A; and autosomal recessive congenital ichthyosis 4B. Orthologous to human ABCA12 (ATP binding cassette subfamily A member 12); INTERACTS WITH bisphenol A; (-)-demecolcine (ortholog); 1,1,1-trichloroethane (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: ATP-binding cassette sub-family A member 12; ATP-binding cassette, sub-family A (ABC1), member 12; ATP-binding cassette, subfamily A (ABC1), member 12; LOC301482; LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 12
Orthologs:
Homo sapiens (human) : ABCA12 (ATP binding cassette subfamily A member 12)  HGNC  Alliance
Mus musculus (house mouse) : Abca12 (ATP-binding cassette, sub-family A (ABC1), member 12)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Abca12 (ATP binding cassette subfamily A member 12)
Pan paniscus (bonobo/pygmy chimpanzee) : ABCA12 (ATP binding cassette subfamily A member 12)
Canis lupus familiaris (dog) : ABCA12 (ATP binding cassette subfamily A member 12)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Abca12 (ATP binding cassette subfamily A member 12)
Sus scrofa (pig) : ABCA12 (ATP binding cassette subfamily A member 12)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0978,521,477 - 78,693,421 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0978,296,546 - 78,466,160 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4970,328,327 - 70,501,128 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1970,475,308 - 70,648,110 (-)NCBI
Celera970,239,719 - 70,413,488 (-)NCBICelera
Cytogenetic Map9q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Abca12
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1304586
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.