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Gene: Sema4a (semaphorin 4A) Rattus norvegicus
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Symbol: Sema4a
Name: semaphorin 4A
Description: Predicted to have chemorepellent activity and semaphorin receptor binding activity. Predicted to be involved in several processes, including T-helper 1 cell differentiation; regulation of cell migration; and regulation of nervous system development. Predicted to localize to extracellular space and integral component of plasma membrane. Human ortholog(s) of this gene implicated in cone-rod dystrophy 10 and retinitis pigmentosa 35. Orthologous to human SEMA4A (semaphorin 4A); INTERACTS WITH 4,4'-diaminodiphenylmethane; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC310630; sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A; semaphorin-4A
Orthologs:
Homo sapiens (human) : SEMA4A (semaphorin 4A)  HGNC  Alliance
Mus musculus (house mouse) : Sema4a (sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sema4a (semaphorin 4A)
Pan paniscus (bonobo/pygmy chimpanzee) : SEMA4A (semaphorin 4A)
Canis lupus familiaris (dog) : SEMA4A (semaphorin 4A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sema4a (semaphorin 4A)
Sus scrofa (pig) : SEMA4A (semaphorin 4A)
Chlorocebus sabaeus (African green monkey) : SEMA4A (semaphorin 4A)
Heterocephalus glaber (naked mole-rat) : Sema4a (semaphorin 4A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02187,799,568 - 187,823,014 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2187,799,568 - 187,822,997 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02207,201,920 - 207,225,358 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42180,552,405 - 180,570,359 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12180,502,513 - 180,520,465 (-)NCBI
Celera2167,841,037 - 167,859,037 (-)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sema4a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1304636
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-05-05
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.