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Gene: Ccdc115 (coiled-coil domain containing 115) Rattus norvegicus
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Symbol: Ccdc115
Name: coiled-coil domain containing 115
Description: Predicted to have unfolded protein binding activity. Predicted to be involved in cellular cation homeostasis; cellular response to increased oxygen levels; and lysosomal protein catabolic process. Predicted to localize to several cellular components, including the endoplasmic reticulum-Golgi intermediate compartment; extrinsic component of endoplasmic reticulum membrane; and vacuole. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type IIo. Orthologous to human CCDC115 (coiled-coil domain containing 115); INTERACTS WITH acrylamide; bisphenol A; cobalt dichloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: coiled-coil domain-containing protein 115; LOC363213; RGD1304653; similar to 2310061I09Rik protein
Orthologs:
Homo sapiens (human) : CCDC115 (coiled-coil domain containing 115)  HGNC  Alliance
Mus musculus (house mouse) : Ccdc115 (coiled-coil domain containing 115)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ccdc115 (coiled-coil domain containing 115)
Pan paniscus (bonobo/pygmy chimpanzee) : CCDC115 (coiled-coil domain containing 115)
Canis lupus familiaris (dog) : CCDC115 (coiled-coil domain containing 115)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ccdc115 (coiled-coil domain containing 115)
Sus scrofa (pig) : CCDC115 (coiled-coil domain containing 115)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0937,774,876 - 37,778,839 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl937,775,311 - 37,779,967 (+)Ensembl
Rnor_5.0937,461,820 - 37,465,783 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4933,175,664 - 33,179,627 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1933,175,949 - 33,180,634 (-)NCBI
Celera934,441,582 - 34,445,540 (-)NCBICelera
Cytogenetic Map9q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ccdc115
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1304653
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.