Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Slc39a6 (solute carrier family 39 member 6) Rattus norvegicus
Analyze
Symbol: Slc39a6
Name: solute carrier family 39 member 6
Description: Predicted to have zinc ion transmembrane transporter activity. Predicted to be involved in cellular zinc ion homeostasis and zinc ion import across plasma membrane. Predicted to localize to the endoplasmic reticulum; integral component of plasma membrane; and lamellipodium membrane. Orthologous to human SLC39A6 (solute carrier family 39 member 6); INTERACTS WITH (+)-schisandrin B; 1-naphthyl isothiocyanate; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC291733; solute carrier family 39 (metal ion transporter), member 6; solute carrier family 39 (zinc transporter), member 6; zinc transporter ZIP6; ZIP-6; zrt- and Irt-like protein 6
Orthologs:
Homo sapiens (human) : SLC39A6 (solute carrier family 39 member 6)  HGNC  Alliance
Mus musculus (house mouse) : Slc39a6 (solute carrier family 39 (metal ion transporter), member 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc39a6 (solute carrier family 39 member 6)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC39A6 (solute carrier family 39 member 6)
Canis lupus familiaris (dog) : SLC39A6 (solute carrier family 39 member 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc39a6 (solute carrier family 39 member 6)
Sus scrofa (pig) : SLC39A6 (solute carrier family 39 member 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01816,523,450 - 16,543,992 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1816,522,982 - 16,543,992 (-)Ensembl
Rnor_5.01816,277,809 - 16,303,318 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41816,353,725 - 16,374,267 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11816,380,371 - 16,400,913 (-)NCBI
Celera1815,793,993 - 15,814,535 (-)NCBICelera
Cytogenetic Map18p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Slc39a6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1304664
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.