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Gene: Smarce1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1) Rattus norvegicus
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Symbol: Smarce1
Name: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
Description: Exhibits protein N-terminus binding activity. Involved in brain development; negative regulation of transcription, DNA-templated; and spermatid development. Localizes to the nucleus. Human ortholog(s) of this gene implicated in familial meningioma. Orthologous to human SMARCE1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; INTERACTS WITH 6-propyl-2-thiouracil; benzo[a]pyrene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: BAF57; BRG1-associated factor 57; LOC303518; RGD1304726; similar to RIKEN cDNA 6330509G02; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01087,116,827 - 87,138,890 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01086,912,863 - 86,934,554 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41088,104,643 - 88,127,707 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11927,930,282 - 27,931,646 (-)NCBI
Celera1082,899,032 - 82,919,746 (-)NCBICelera
Cytogenetic Map10q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Smarce1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1304726
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.