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Gene: Loxhd1 (lipoxygenase homology domains 1) Rattus norvegicus
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Symbol: Loxhd1
Name: lipoxygenase homology domains 1
Description: Predicted to have catalase activity and heme binding activity. Predicted to be involved in sensory perception of sound. Predicted to localize to the stereocilium. Human ortholog(s) of this gene implicated in Fuchs' endothelial dystrophy; autosomal recessive nonsyndromic deafness 77; and orofacial cleft. Orthologous to human LOXHD1 (lipoxygenase homology domains 1); INTERACTS WITH acrylamide; bisphenol A; trichloroethene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: lipoxygenase homology domain-containing protein 1; LOC291427; similar to lipoxygenase homology domains 1
Orthologs:
Homo sapiens (human) : LOXHD1 (lipoxygenase homology domains 1)  HGNC  Alliance
Mus musculus (house mouse) : Loxhd1 (lipoxygenase homology domains 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Loxhd1 (lipoxygenase homology domains 1)
Pan paniscus (bonobo/pygmy chimpanzee) : LOXHD1 (lipoxygenase homology domains 1)
Canis lupus familiaris (dog) : LOXHD1 (lipoxygenase homology domains 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Loxhd1 (lipoxygenase homology domains 1)
Sus scrofa (pig) : LOXHD1 (lipoxygenase homology domains 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01873,645,365 - 73,812,271 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01873,325,886 - 73,492,157 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41874,297,027 - 74,399,097 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11874,319,056 - 74,472,488 (+)NCBI
Celera1869,340,110 - 69,490,847 (+)NCBICelera
Cytogenetic Map18q12.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Loxhd1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1304815
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.