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Gene: Capn7 (calpain 7) Rattus norvegicus
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Symbol: Capn7
Name: calpain 7
Description: Predicted to have MIT domain binding activity and endopeptidase activity. Predicted to be involved in positive regulation of epithelial cell migration and self proteolysis. Orthologous to human CAPN7 (calpain 7); INTERACTS WITH bisphenol A; gentamycin; 1,2-dichloroethane (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: calpain-7; LOC306260; MGC124688
Orthologs:
Homo sapiens (human) : CAPN7 (calpain 7)  HGNC  Alliance
Mus musculus (house mouse) : Capn7 (calpain 7)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Capn7 (calpain 7)
Pan paniscus (bonobo/pygmy chimpanzee) : CAPN7 (calpain 7)
Canis lupus familiaris (dog) : CAPN7 (calpain 7)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Capn7 (calpain 7)
Sus scrofa (pig) : CAPN7 (calpain 7)
Chlorocebus sabaeus (African green monkey) : CAPN7 (calpain 7)
Heterocephalus glaber (naked mole-rat) : Capn7 (calpain 7)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0167,435,541 - 7,472,483 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl167,435,634 - 7,471,807 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0167,371,439 - 7,407,437 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4166,784,270 - 6,820,953 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1166,784,261 - 6,820,261 (+)NCBI
Celera168,607,596 - 8,643,420 (-)NCBICelera
Cytogenetic Map16p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Capn7
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1304855
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.