Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Trappc2l (trafficking protein particle complex 2-like) Rattus norvegicus
Analyze
Symbol: Trappc2l
Name: trafficking protein particle complex 2-like
Description: Predicted to be involved in protein complex oligomerization. Predicted to localize to the TRAPP complex; cytosol; and intracellular membrane-bounded organelle. Orthologous to human TRAPPC2L (trafficking protein particle complex 2 like); INTERACTS WITH amphetamine; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC292074; RGD1304906; similar to hypothetical protein, 2-6; trafficking protein particle complex subunit 2-like protein
Orthologs:
Homo sapiens (human) : TRAPPC2L (trafficking protein particle complex 2 like)  HGNC  Alliance
Mus musculus (house mouse) : Trappc2l (trafficking protein particle complex 2-like)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trappc2l (trafficking protein particle complex 2 like)
Pan paniscus (bonobo/pygmy chimpanzee) : TRAPPC2L (trafficking protein particle complex 2 like)
Canis lupus familiaris (dog) : TRAPPC2L (trafficking protein particle complex 2 like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trappc2l (trafficking protein particle complex 2 like)
Sus scrofa (pig) : TRAPPC2L (trafficking protein particle complex 2 like)
Chlorocebus sabaeus (African green monkey) : TRAPPC2L (trafficking protein particle complex 2 like)
Heterocephalus glaber (naked mole-rat) : Trappc2l (trafficking protein particle complex 2 like)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01955,423,350 - 55,428,551 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1955,423,350 - 55,427,036 (+)Ensembl
Rnor_5.01966,131,866 - 66,135,551 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41952,890,720 - 52,894,406 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11952,895,601 - 52,899,288 (+)NCBI
Celera1949,901,904 - 49,905,589 (+)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Trappc2l
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1304906
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.