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Gene: Ddx42 (DEAD-box helicase 42) Rattus norvegicus
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Symbol: Ddx42
Name: DEAD-box helicase 42
Description: Predicted to have RNA binding activity and RNA helicase activity. Predicted to be involved in protein localization and regulation of apoptotic process. Predicted to localize to the cytosol and nuclear speck. Orthologous to human DDX42 (DEAD-box helicase 42); PARTICIPATES IN spliceosome pathway; INTERACTS WITH (+)-schisandrin B; 3H-1,2-dithiole-3-thione; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATP-dependent RNA helicase DDX42; DEAD (Asp-Glu-Ala-Asp) box helicase 42; DEAD (Asp-Glu-Ala-Asp) box polypeptide 42; LOC303607
Orthologs:
Homo sapiens (human) : DDX42 (DEAD-box helicase 42)  HGNC  Alliance
Mus musculus (house mouse) : Ddx42 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 42)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ddx42 (DEAD-box helicase 42)
Pan paniscus (bonobo/pygmy chimpanzee) : DDX42 (DEAD-box helicase 42)
Canis lupus familiaris (dog) : DDX42 (DEAD-box helicase 42)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ddx42 (DEAD-box helicase 42)
Sus scrofa (pig) : DDX42 (DEAD-box helicase 42)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01094,407,094 - 94,439,052 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01094,158,482 - 94,190,354 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41095,612,667 - 95,644,162 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11095,634,270 - 95,658,050 (+)NCBI
Celera1089,825,372 - 89,856,876 (+)NCBICelera
Cytogenetic Map10q32.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ddx42
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1304909
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.