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Gene: Ddx17 (DEAD-box helicase 17) Rattus norvegicus
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Symbol: Ddx17
Name: DEAD-box helicase 17
Description: Predicted to have RNA binding activity; RNA helicase activity; and transcription coactivator activity. Predicted to be involved in several processes, including RNA metabolic process; intracellular steroid hormone receptor signaling pathway; and regulation of RNA metabolic process. Predicted to localize to the cytoplasm; nuclear speck; and ribonucleoprotein complex. Orthologous to human DDX17 (DEAD-box helicase 17); INTERACTS WITH all-trans-retinoic acid; bisphenol A; copper atom.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: DEAD (Asp-Glu-Ala-Asp) box helicase 17; DEAD (Asp-Glu-Ala-Asp) box polypeptide 17; LOC315133; MGC109323; probable ATP-dependent RNA helicase DDX17
Orthologs:
Homo sapiens (human) : DDX17 (DEAD-box helicase 17)  HGNC  Alliance
Mus musculus (house mouse) : Ddx17 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 17)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ddx17 (DEAD-box helicase 17)
Pan paniscus (bonobo/pygmy chimpanzee) : DDX17 (DEAD-box helicase 17)
Canis lupus familiaris (dog) : DDX17 (DEAD-box helicase 17)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ddx17 (DEAD-box helicase 17)
Sus scrofa (pig) : DDX17 (DEAD-box helicase 17)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07120,761,843 - 120,765,012 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07120,754,842 - 120,758,011 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47117,552,040 - 117,554,887 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17117,570,607 - 117,591,584 (+)NCBI
Celera7107,422,522 - 107,425,390 (-)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ddx17
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1304945
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.