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Gene: Sec61b (Sec61 translocon beta subunit) Rattus norvegicus
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Symbol: Sec61b
Name: Sec61 translocon beta subunit
Description: Predicted to contribute to P-P-bond-hydrolysis-driven protein transmembrane transporter activity. Predicted to be involved in intracellular protein transport and ubiquitin-dependent ERAD pathway. Predicted to localize to the endoplasmic reticulum Sec complex and endoplasmic reticulum quality control compartment. Orthologous to human SEC61B (SEC61 translocon beta subunit); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; phagocytosis pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,4-dinitrotoluene; amphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC298068; protein transport protein Sec61 subunit beta; Sec61 beta subunit
Orthologs:
Homo sapiens (human) : SEC61B (SEC61 translocon beta subunit)  HGNC  Alliance
Mus musculus (house mouse) : Sec61b (Sec61 beta subunit)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sec61b (SEC61 translocon beta subunit)
Pan paniscus (bonobo/pygmy chimpanzee) : SEC61B (SEC61 translocon beta subunit)
Canis lupus familiaris (dog) : SEC61B (SEC61 translocon beta subunit)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sec61b (SEC61 translocon beta subunit)
Sus scrofa (pig) : SEC61B (SEC61 translocon beta subunit)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0563,192,322 - 63,200,532 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl563,192,298 - 63,200,508 (+)Ensembl
Rnor_5.0567,711,881 - 67,720,091 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4564,096,869 - 64,105,082 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1564,101,911 - 64,110,117 (+)NCBI
Celera565,811,176 - 65,819,388 (-)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Sec61b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1304997
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.